Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 ST3GAL5-204ENST00000393808 2236 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GTF2A1P52655 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GTF2A1P52655 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GTF2A1P52655 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
GTF2A1P52655 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
GTF2A1P52655 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
GTF2A1P52655 KHSRPP1-201ENST00000427983 1768 ntBASIC14.78□□□□□ -0.04
GTF2A1P52655 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GTF2A1P52655 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
GTF2A1P52655 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GTF2A1P52655 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GTF2A1P52655 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.78□□□□□ -0.04
GTF2A1P52655 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GTF2A1P52655 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GTF2A1P52655 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
GTF2A1P52655 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
GTF2A1P52655 SHROOM2P1-201ENST00000434773 2384 ntBASIC14.77□□□□□ -0.04
GTF2A1P52655 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
GTF2A1P52655 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GTF2A1P52655 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GTF2A1P52655 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
GTF2A1P52655 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
GTF2A1P52655 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
GTF2A1P52655 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
GTF2A1P52655 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.77□□□□□ -0.04
GTF2A1P52655 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
GTF2A1P52655 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.77□□□□□ -0.04
GTF2A1P52655 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
GTF2A1P52655 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.77□□□□□ -0.05
GTF2A1P52655 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.77□□□□□ -0.05
GTF2A1P52655 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.77□□□□□ -0.05
GTF2A1P52655 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.77□□□□□ -0.05
GTF2A1P52655 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC14.77□□□□□ -0.05
GTF2A1P52655 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.77□□□□□ -0.05
GTF2A1P52655 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GTF2A1P52655 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.77□□□□□ -0.05
GTF2A1P52655 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
GTF2A1P52655 TNRC18P1-201ENST00000502875 3650 ntBASIC14.77□□□□□ -0.05
GTF2A1P52655 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
GTF2A1P52655 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GTF2A1P52655 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
GTF2A1P52655 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.77□□□□□ -0.05
GTF2A1P52655 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GTF2A1P52655 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GTF2A1P52655 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GTF2A1P52655 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
GTF2A1P52655 STK11IP-204ENST00000456909 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GTF2A1P52655 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
GTF2A1P52655 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.76□□□□□ -0.05
GTF2A1P52655 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GTF2A1P52655 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GTF2A1P52655 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
GTF2A1P52655 SIGLEC16-201ENST00000599858 1437 ntBASIC14.76□□□□□ -0.05
GTF2A1P52655 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.76□□□□□ -0.05
GTF2A1P52655 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GTF2A1P52655 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GTF2A1P52655 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
GTF2A1P52655 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
GTF2A1P52655 AC092053.3-201ENST00000641308 4975 ntBASIC14.76□□□□□ -0.05
GTF2A1P52655 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.76□□□□□ -0.05
GTF2A1P52655 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.76□□□□□ -0.05
GTF2A1P52655 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC14.76□□□□□ -0.05
GTF2A1P52655 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC14.76□□□□□ -0.05
GTF2A1P52655 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.76□□□□□ -0.05
GTF2A1P52655 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GTF2A1P52655 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GTF2A1P52655 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.76□□□□□ -0.05
GTF2A1P52655 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GTF2A1P52655 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.76□□□□□ -0.05
GTF2A1P52655 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
GTF2A1P52655 AL121672.3-201ENST00000608644 468 ntBASIC14.76□□□□□ -0.05
GTF2A1P52655 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.76□□□□□ -0.05
GTF2A1P52655 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GTF2A1P52655 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
GTF2A1P52655 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.76□□□□□ -0.05
GTF2A1P52655 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
GTF2A1P52655 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GTF2A1P52655 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC14.76□□□□□ -0.05
GTF2A1P52655 AC111170.3-201ENST00000624282 2464 ntBASIC14.76□□□□□ -0.05
GTF2A1P52655 DHX30-206ENST00000446256 3660 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
GTF2A1P52655 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GTF2A1P52655 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GTF2A1P52655 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.76□□□□□ -0.05
GTF2A1P52655 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
GTF2A1P52655 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.76□□□□□ -0.05
GTF2A1P52655 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.76□□□□□ -0.05
GTF2A1P52655 NSUN5P1-202ENST00000421140 1535 ntBASIC14.76□□□□□ -0.05
GTF2A1P52655 NSUN5P2-203ENST00000457352 1529 ntBASIC14.76□□□□□ -0.05
GTF2A1P52655 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GTF2A1P52655 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
GTF2A1P52655 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GTF2A1P52655 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GTF2A1P52655 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GTF2A1P52655 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
GTF2A1P52655 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
GTF2A1P52655 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GTF2A1P52655 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GTF2A1P52655 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GTF2A1P52655 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC14.75□□□□□ -0.05
GTF2A1P52655 KRT18P1-202ENST00000452408 1331 ntBASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms