Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
KNTC1P50748 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
KNTC1P50748 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
KNTC1P50748 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KNTC1P50748 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.2□□□□□ -0.14
KNTC1P50748 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
KNTC1P50748 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.2□□□□□ -0.14
KNTC1P50748 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.2□□□□□ -0.14
KNTC1P50748 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
KNTC1P50748 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
KNTC1P50748 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
KNTC1P50748 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
KNTC1P50748 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KNTC1P50748 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KNTC1P50748 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.19□□□□□ -0.14
KNTC1P50748 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC14.19□□□□□ -0.14
KNTC1P50748 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC14.19□□□□□ -0.14
KNTC1P50748 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KNTC1P50748 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
KNTC1P50748 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KNTC1P50748 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KNTC1P50748 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.19□□□□□ -0.14
KNTC1P50748 KRT18P9-201ENST00000604826 1300 ntBASIC14.19□□□□□ -0.14
KNTC1P50748 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KNTC1P50748 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KNTC1P50748 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
KNTC1P50748 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KNTC1P50748 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KNTC1P50748 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.19□□□□□ -0.14
KNTC1P50748 AC008741.2-201ENST00000612792 3115 ntBASIC14.19□□□□□ -0.14
KNTC1P50748 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
KNTC1P50748 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KNTC1P50748 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
KNTC1P50748 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
KNTC1P50748 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KNTC1P50748 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
KNTC1P50748 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.19□□□□□ -0.14
KNTC1P50748 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.19□□□□□ -0.14
KNTC1P50748 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
KNTC1P50748 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
KNTC1P50748 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.19□□□□□ -0.14
KNTC1P50748 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
KNTC1P50748 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.19□□□□□ -0.14
KNTC1P50748 TLE1P1-201ENST00000422965 589 ntBASIC14.19□□□□□ -0.14
KNTC1P50748 DUTP3-201ENST00000450025 415 ntBASIC14.19□□□□□ -0.14
KNTC1P50748 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
KNTC1P50748 TMCO5B-205ENST00000530020 894 ntBASIC14.19□□□□□ -0.14
KNTC1P50748 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.19□□□□□ -0.14
KNTC1P50748 AC107464.3-201ENST00000609172 737 ntBASIC14.19□□□□□ -0.14
KNTC1P50748 AL161773.1-201ENST00000624845 863 ntBASIC14.19□□□□□ -0.14
KNTC1P50748 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
KNTC1P50748 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KNTC1P50748 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
KNTC1P50748 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KNTC1P50748 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.19□□□□□ -0.14
KNTC1P50748 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KNTC1P50748 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.19□□□□□ -0.14
KNTC1P50748 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.19□□□□□ -0.14
KNTC1P50748 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KNTC1P50748 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KNTC1P50748 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KNTC1P50748 LINC01165-201ENST00000445190 1623 ntBASIC14.19□□□□□ -0.14
KNTC1P50748 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
KNTC1P50748 AC006058.4-201ENST00000624016 1670 ntBASIC14.18□□□□□ -0.14
KNTC1P50748 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
KNTC1P50748 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
KNTC1P50748 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.18□□□□□ -0.14
KNTC1P50748 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KNTC1P50748 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KNTC1P50748 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.18□□□□□ -0.14
KNTC1P50748 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC14.18□□□□□ -0.14
KNTC1P50748 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC14.18□□□□□ -0.14
KNTC1P50748 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
KNTC1P50748 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC14.18□□□□□ -0.14
KNTC1P50748 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
KNTC1P50748 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
KNTC1P50748 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
KNTC1P50748 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KNTC1P50748 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KNTC1P50748 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KNTC1P50748 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
KNTC1P50748 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.18□□□□□ -0.14
KNTC1P50748 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.18□□□□□ -0.14
KNTC1P50748 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.18□□□□□ -0.14
KNTC1P50748 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KNTC1P50748 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.18□□□□□ -0.14
KNTC1P50748 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KNTC1P50748 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KNTC1P50748 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
KNTC1P50748 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KNTC1P50748 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
KNTC1P50748 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KNTC1P50748 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
KNTC1P50748 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
KNTC1P50748 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KNTC1P50748 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KNTC1P50748 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.18□□□□□ -0.14
KNTC1P50748 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.18□□□□□ -0.14
KNTC1P50748 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KNTC1P50748 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms