Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
RFC5P40937 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.53■□□□□ 0.24
RFC5P40937 AC008825.2-201ENST00000603374 718 ntBASIC16.53■□□□□ 0.24
RFC5P40937 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.53■□□□□ 0.24
RFC5P40937 AL136301.1-201ENST00000615830 422 ntBASIC16.53■□□□□ 0.24
RFC5P40937 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
RFC5P40937 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC5P40937 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC5P40937 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RFC5P40937 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC5P40937 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC5P40937 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC5P40937 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RFC5P40937 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.53■□□□□ 0.24
RFC5P40937 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.53■□□□□ 0.24
RFC5P40937 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RFC5P40937 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
RFC5P40937 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
RFC5P40937 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.53■□□□□ 0.24
RFC5P40937 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
RFC5P40937 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
RFC5P40937 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFC5P40937 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RFC5P40937 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RFC5P40937 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFC5P40937 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.52■□□□□ 0.24
RFC5P40937 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RFC5P40937 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFC5P40937 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
RFC5P40937 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFC5P40937 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RFC5P40937 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RFC5P40937 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFC5P40937 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFC5P40937 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFC5P40937 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFC5P40937 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFC5P40937 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.52■□□□□ 0.24
RFC5P40937 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFC5P40937 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFC5P40937 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFC5P40937 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFC5P40937 AC010141.1-201ENST00000411585 623 ntBASIC16.52■□□□□ 0.24
RFC5P40937 AL354877.1-201ENST00000424412 413 ntBASIC16.52■□□□□ 0.24
RFC5P40937 POM121L10P-201ENST00000436994 1285 ntBASIC16.52■□□□□ 0.24
RFC5P40937 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.52■□□□□ 0.24
RFC5P40937 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFC5P40937 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RFC5P40937 BX088702.1-201ENST00000610784 235 ntBASIC16.52■□□□□ 0.24
RFC5P40937 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFC5P40937 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.52■□□□□ 0.24
RFC5P40937 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.52■□□□□ 0.24
RFC5P40937 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFC5P40937 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFC5P40937 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.52■□□□□ 0.24
RFC5P40937 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.52■□□□□ 0.23
RFC5P40937 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RFC5P40937 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
RFC5P40937 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.23
RFC5P40937 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RFC5P40937 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.52■□□□□ 0.23
RFC5P40937 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.52■□□□□ 0.23
RFC5P40937 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
RFC5P40937 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RFC5P40937 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RFC5P40937 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.51■□□□□ 0.23
RFC5P40937 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC5P40937 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RFC5P40937 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.51■□□□□ 0.23
RFC5P40937 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC5P40937 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RFC5P40937 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RFC5P40937 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RFC5P40937 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RFC5P40937 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RFC5P40937 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.51■□□□□ 0.23
RFC5P40937 LINC01101-201ENST00000622953 1884 ntBASIC16.51■□□□□ 0.23
RFC5P40937 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.51■□□□□ 0.23
RFC5P40937 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC5P40937 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC5P40937 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC5P40937 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.51■□□□□ 0.23
RFC5P40937 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.51■□□□□ 0.23
RFC5P40937 AC104306.2-201ENST00000451877 341 ntBASIC16.51■□□□□ 0.23
RFC5P40937 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC5P40937 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC5P40937 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC5P40937 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC5P40937 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.51■□□□□ 0.23
RFC5P40937 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.51■□□□□ 0.23
RFC5P40937 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.51■□□□□ 0.23
RFC5P40937 DIO1-215ENST00000610607 796 ntTSL 5 BASIC16.51■□□□□ 0.23
RFC5P40937 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.51■□□□□ 0.23
RFC5P40937 AL008638.5-201ENST00000623814 1298 ntBASIC16.51■□□□□ 0.23
RFC5P40937 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC5P40937 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.51■□□□□ 0.23
RFC5P40937 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC5P40937 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC5P40937 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC5P40937 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms