Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
GDNFP39905 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GDNFP39905 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
GDNFP39905 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GDNFP39905 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GDNFP39905 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GDNFP39905 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
GDNFP39905 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.15□□□□□ -0.3
GDNFP39905 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.15□□□□□ -0.3
GDNFP39905 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GDNFP39905 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.15□□□□□ -0.3
GDNFP39905 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
GDNFP39905 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
GDNFP39905 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.15□□□□□ -0.3
GDNFP39905 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.15□□□□□ -0.3
GDNFP39905 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GDNFP39905 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
GDNFP39905 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GDNFP39905 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GDNFP39905 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
GDNFP39905 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.15□□□□□ -0.3
GDNFP39905 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GDNFP39905 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.15□□□□□ -0.3
GDNFP39905 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
GDNFP39905 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
GDNFP39905 MTND6P24-201ENST00000440466 518 ntBASIC13.15□□□□□ -0.3
GDNFP39905 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.15□□□□□ -0.3
GDNFP39905 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.15□□□□□ -0.3
GDNFP39905 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.15□□□□□ -0.3
GDNFP39905 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.15□□□□□ -0.3
GDNFP39905 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.15□□□□□ -0.3
GDNFP39905 RN7SL828P-201ENST00000607615 303 ntBASIC13.15□□□□□ -0.3
GDNFP39905 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.15□□□□□ -0.3
GDNFP39905 AC007967.4-201ENST00000614700 386 ntBASIC13.15□□□□□ -0.3
GDNFP39905 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.15□□□□□ -0.3
GDNFP39905 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
GDNFP39905 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GDNFP39905 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
GDNFP39905 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GDNFP39905 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GDNFP39905 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.15□□□□□ -0.3
GDNFP39905 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GDNFP39905 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
GDNFP39905 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.15□□□□□ -0.3
GDNFP39905 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GDNFP39905 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.15□□□□□ -0.3
GDNFP39905 REXO1L4P-201ENST00000605109 1937 ntBASIC13.15□□□□□ -0.3
GDNFP39905 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GDNFP39905 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
GDNFP39905 AC007787.1-201ENST00000588095 1583 ntBASIC13.15□□□□□ -0.3
GDNFP39905 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GDNFP39905 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.15□□□□□ -0.31
GDNFP39905 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
GDNFP39905 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
GDNFP39905 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.15□□□□□ -0.31
GDNFP39905 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
GDNFP39905 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
GDNFP39905 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GDNFP39905 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GDNFP39905 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GDNFP39905 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
GDNFP39905 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.14□□□□□ -0.31
GDNFP39905 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.14□□□□□ -0.31
GDNFP39905 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GDNFP39905 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
GDNFP39905 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GDNFP39905 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
GDNFP39905 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GDNFP39905 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GDNFP39905 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GDNFP39905 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GDNFP39905 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.14□□□□□ -0.31
GDNFP39905 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GDNFP39905 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
GDNFP39905 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GDNFP39905 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
GDNFP39905 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GDNFP39905 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
GDNFP39905 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.14□□□□□ -0.31
GDNFP39905 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.14□□□□□ -0.31
GDNFP39905 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
GDNFP39905 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GDNFP39905 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.14□□□□□ -0.31
GDNFP39905 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.14□□□□□ -0.31
GDNFP39905 AL512356.2-201ENST00000546955 174 ntBASIC13.14□□□□□ -0.31
GDNFP39905 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.14□□□□□ -0.31
GDNFP39905 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GDNFP39905 AC026979.3-201ENST00000607315 403 ntBASIC13.14□□□□□ -0.31
GDNFP39905 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.14□□□□□ -0.31
GDNFP39905 Z92544.3-201ENST00000624747 417 ntBASIC13.14□□□□□ -0.31
GDNFP39905 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.14□□□□□ -0.31
GDNFP39905 AC079781.4-201ENST00000641908 219 ntBASIC13.14□□□□□ -0.31
GDNFP39905 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GDNFP39905 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GDNFP39905 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
GDNFP39905 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GDNFP39905 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.14□□□□□ -0.31
GDNFP39905 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.14□□□□□ -0.31
GDNFP39905 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
GDNFP39905 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms