Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 OR6D1P-202ENST00000641007 5290 ntBASIC19.82■□□□□ 0.76
USP6P35125 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP6P35125 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC19.82■□□□□ 0.76
USP6P35125 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.82■□□□□ 0.76
USP6P35125 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP6P35125 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP6P35125 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP6P35125 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
USP6P35125 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
USP6P35125 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC19.82■□□□□ 0.76
USP6P35125 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC19.82■□□□□ 0.76
USP6P35125 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
USP6P35125 KRT8P1-201ENST00000557533 1207 ntBASIC19.82■□□□□ 0.76
USP6P35125 AP001184.1-201ENST00000637936 376 ntBASIC19.82■□□□□ 0.76
USP6P35125 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP6P35125 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP6P35125 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP6P35125 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC19.82■□□□□ 0.76
USP6P35125 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP6P35125 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP6P35125 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
USP6P35125 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP6P35125 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
USP6P35125 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
USP6P35125 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
USP6P35125 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP6P35125 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
USP6P35125 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
USP6P35125 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP6P35125 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP6P35125 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP6P35125 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP6P35125 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP6P35125 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP6P35125 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC19.81■□□□□ 0.76
USP6P35125 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC19.81■□□□□ 0.76
USP6P35125 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC19.81■□□□□ 0.76
USP6P35125 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
USP6P35125 NEU3-207ENST00000534628 746 ntTSL 2 BASIC19.81■□□□□ 0.76
USP6P35125 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC19.81■□□□□ 0.76
USP6P35125 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC19.81■□□□□ 0.76
USP6P35125 AC087392.5-201ENST00000612517 489 ntBASIC19.81■□□□□ 0.76
USP6P35125 AC105137.3-201ENST00000617588 984 ntBASIC19.81■□□□□ 0.76
USP6P35125 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
USP6P35125 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
USP6P35125 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP6P35125 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC19.81■□□□□ 0.76
USP6P35125 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
USP6P35125 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC19.81■□□□□ 0.76
USP6P35125 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP6P35125 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP6P35125 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
USP6P35125 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
USP6P35125 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP6P35125 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP6P35125 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC19.81■□□□□ 0.76
USP6P35125 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP6P35125 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP6P35125 PARN-202ENST00000420015 2360 ntTSL 2 BASIC19.8■□□□□ 0.76
USP6P35125 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.8■□□□□ 0.76
USP6P35125 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP6P35125 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP6P35125 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
USP6P35125 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP6P35125 KRT17P5-201ENST00000332088 839 ntBASIC19.8■□□□□ 0.76
USP6P35125 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP6P35125 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP6P35125 AL512306.1-201ENST00000432698 848 ntBASIC19.8■□□□□ 0.76
USP6P35125 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC19.8■□□□□ 0.76
USP6P35125 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC19.8■□□□□ 0.76
USP6P35125 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC19.8■□□□□ 0.76
USP6P35125 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC19.8■□□□□ 0.76
USP6P35125 MT3-203ENST00000565838 421 ntTSL 3 BASIC19.8■□□□□ 0.76
USP6P35125 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC19.8■□□□□ 0.76
USP6P35125 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC19.8■□□□□ 0.76
USP6P35125 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
USP6P35125 AC107464.3-201ENST00000609172 737 ntBASIC19.8■□□□□ 0.76
USP6P35125 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC19.8■□□□□ 0.76
USP6P35125 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP6P35125 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP6P35125 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC19.8■□□□□ 0.76
USP6P35125 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP6P35125 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP6P35125 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP6P35125 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
USP6P35125 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC19.8■□□□□ 0.76
USP6P35125 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP6P35125 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP6P35125 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP6P35125 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP6P35125 ACE-204ENST00000428043 5120 ntTSL 2 BASIC19.8■□□□□ 0.76
USP6P35125 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP6P35125 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP6P35125 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP6P35125 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP6P35125 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP6P35125 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC19.79■□□□□ 0.76
USP6P35125 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC19.79■□□□□ 0.76
USP6P35125 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC19.79■□□□□ 0.76
USP6P35125 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms