Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC018638.5-201ENST00000450885 754 ntBASIC18.23■□□□□ 0.51
TM4SF1P30408 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC18.23■□□□□ 0.51
TM4SF1P30408 IGHVIII-5-2-201ENST00000522505 261 ntBASIC18.23■□□□□ 0.51
TM4SF1P30408 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TM4SF1P30408 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TM4SF1P30408 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
TM4SF1P30408 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC18.23■□□□□ 0.51
TM4SF1P30408 AL118516.1-201ENST00000564152 670 ntBASIC18.23■□□□□ 0.51
TM4SF1P30408 HKR1-225ENST00000592168 566 ntTSL 4 BASIC18.23■□□□□ 0.51
TM4SF1P30408 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM4SF1P30408 AC140113.1-201ENST00000603467 169 ntBASIC18.23■□□□□ 0.51
TM4SF1P30408 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
TM4SF1P30408 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM4SF1P30408 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM4SF1P30408 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM4SF1P30408 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM4SF1P30408 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.23■□□□□ 0.51
TM4SF1P30408 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM4SF1P30408 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM4SF1P30408 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TM4SF1P30408 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC18.22■□□□□ 0.51
TM4SF1P30408 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.22■□□□□ 0.51
TM4SF1P30408 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TM4SF1P30408 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC18.22■□□□□ 0.51
TM4SF1P30408 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.22■□□□□ 0.51
TM4SF1P30408 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM4SF1P30408 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TM4SF1P30408 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM4SF1P30408 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM4SF1P30408 WASH3P-207ENST00000560956 1394 ntBASIC18.22■□□□□ 0.51
TM4SF1P30408 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM4SF1P30408 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM4SF1P30408 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM4SF1P30408 FAU-202ENST00000434372 533 ntTSL 2 BASIC18.22■□□□□ 0.51
TM4SF1P30408 ERP29P1-201ENST00000442902 706 ntBASIC18.22■□□□□ 0.51
TM4SF1P30408 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM4SF1P30408 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC18.22■□□□□ 0.51
TM4SF1P30408 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM4SF1P30408 RN7SL277P-201ENST00000481521 288 ntBASIC18.22■□□□□ 0.51
TM4SF1P30408 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC18.22■□□□□ 0.51
TM4SF1P30408 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC18.22■□□□□ 0.51
TM4SF1P30408 AC009145.4-201ENST00000625119 1294 ntBASIC18.22■□□□□ 0.51
TM4SF1P30408 API5-203ENST00000455725 2257 ntTSL 2 BASIC18.22■□□□□ 0.51
TM4SF1P30408 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM4SF1P30408 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM4SF1P30408 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC18.22■□□□□ 0.51
TM4SF1P30408 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC18.22■□□□□ 0.51
TM4SF1P30408 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.22■□□□□ 0.51
TM4SF1P30408 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM4SF1P30408 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TM4SF1P30408 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TM4SF1P30408 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TM4SF1P30408 AC139712.1-201ENST00000378256 1875 ntBASIC18.22■□□□□ 0.51
TM4SF1P30408 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM4SF1P30408 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM4SF1P30408 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC18.22■□□□□ 0.51
TM4SF1P30408 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TM4SF1P30408 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TM4SF1P30408 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TM4SF1P30408 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC18.21■□□□□ 0.51
TM4SF1P30408 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.21■□□□□ 0.51
TM4SF1P30408 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TM4SF1P30408 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
TM4SF1P30408 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.21■□□□□ 0.51
TM4SF1P30408 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TM4SF1P30408 PCDHGB8P-201ENST00000502926 1973 ntBASIC18.21■□□□□ 0.51
TM4SF1P30408 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TM4SF1P30408 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.21■□□□□ 0.51
TM4SF1P30408 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC18.21■□□□□ 0.51
TM4SF1P30408 MIR645-201ENST00000385283 94 ntBASIC18.21■□□□□ 0.51
TM4SF1P30408 HCG27-204ENST00000424675 895 ntTSL 3 BASIC18.21■□□□□ 0.51
TM4SF1P30408 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC18.21■□□□□ 0.51
TM4SF1P30408 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC18.21■□□□□ 0.51
TM4SF1P30408 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC18.21■□□□□ 0.51
TM4SF1P30408 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC18.21■□□□□ 0.51
TM4SF1P30408 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.21■□□□□ 0.51
TM4SF1P30408 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TM4SF1P30408 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TM4SF1P30408 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TM4SF1P30408 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
TM4SF1P30408 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TM4SF1P30408 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TM4SF1P30408 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TM4SF1P30408 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TM4SF1P30408 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TM4SF1P30408 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TM4SF1P30408 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TM4SF1P30408 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TM4SF1P30408 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM4SF1P30408 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TM4SF1P30408 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC18.2■□□□□ 0.5
TM4SF1P30408 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TM4SF1P30408 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.2■□□□□ 0.5
TM4SF1P30408 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
TM4SF1P30408 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC18.2■□□□□ 0.5
TM4SF1P30408 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
TM4SF1P30408 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TM4SF1P30408 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM4SF1P30408 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM4SF1P30408 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms