Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.82□□□□□ -0.2
SHC1P29353 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.82□□□□□ -0.2
SHC1P29353 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.82□□□□□ -0.2
SHC1P29353 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.82□□□□□ -0.2
SHC1P29353 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.82□□□□□ -0.2
SHC1P29353 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHC1P29353 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHC1P29353 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SHC1P29353 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHC1P29353 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHC1P29353 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
SHC1P29353 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.82□□□□□ -0.2
SHC1P29353 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.82□□□□□ -0.2
SHC1P29353 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.82□□□□□ -0.2
SHC1P29353 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SHC1P29353 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SHC1P29353 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SHC1P29353 AL157414.3-201ENST00000624276 1954 ntBASIC13.82□□□□□ -0.2
SHC1P29353 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHC1P29353 CU639417.3-201ENST00000624240 1404 ntBASIC13.81□□□□□ -0.2
SHC1P29353 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SHC1P29353 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SHC1P29353 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.81□□□□□ -0.2
SHC1P29353 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.81□□□□□ -0.2
SHC1P29353 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHC1P29353 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.81□□□□□ -0.2
SHC1P29353 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHC1P29353 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHC1P29353 AC006504.5-208ENST00000588784 2401 ntBASIC13.81□□□□□ -0.2
SHC1P29353 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.81□□□□□ -0.2
SHC1P29353 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
SHC1P29353 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SHC1P29353 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.81□□□□□ -0.2
SHC1P29353 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHC1P29353 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
SHC1P29353 RNU1-114P-201ENST00000365297 166 ntBASIC13.81□□□□□ -0.2
SHC1P29353 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
SHC1P29353 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHC1P29353 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.81□□□□□ -0.2
SHC1P29353 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.81□□□□□ -0.2
SHC1P29353 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.81□□□□□ -0.2
SHC1P29353 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.81□□□□□ -0.2
SHC1P29353 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.81□□□□□ -0.2
SHC1P29353 MIR5189-201ENST00000577370 114 ntBASIC13.81□□□□□ -0.2
SHC1P29353 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.81□□□□□ -0.2
SHC1P29353 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.81□□□□□ -0.2
SHC1P29353 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.81□□□□□ -0.2
SHC1P29353 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.81□□□□□ -0.2
SHC1P29353 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.81□□□□□ -0.2
SHC1P29353 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SHC1P29353 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHC1P29353 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
SHC1P29353 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHC1P29353 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHC1P29353 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHC1P29353 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHC1P29353 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.81□□□□□ -0.2
SHC1P29353 AL158070.2-201ENST00000623713 1621 ntBASIC13.81□□□□□ -0.2
SHC1P29353 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHC1P29353 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SHC1P29353 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHC1P29353 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SHC1P29353 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.81□□□□□ -0.2
SHC1P29353 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHC1P29353 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SHC1P29353 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
SHC1P29353 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHC1P29353 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.81□□□□□ -0.2
SHC1P29353 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.81□□□□□ -0.2
SHC1P29353 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHC1P29353 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHC1P29353 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
SHC1P29353 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHC1P29353 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHC1P29353 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SHC1P29353 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHC1P29353 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
SHC1P29353 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SHC1P29353 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHC1P29353 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHC1P29353 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SHC1P29353 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.8□□□□□ -0.2
SHC1P29353 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHC1P29353 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHC1P29353 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SHC1P29353 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHC1P29353 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
SHC1P29353 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SHC1P29353 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.8□□□□□ -0.2
SHC1P29353 REXO1L2P-201ENST00000425429 2069 ntBASIC13.8□□□□□ -0.2
SHC1P29353 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHC1P29353 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHC1P29353 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHC1P29353 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHC1P29353 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHC1P29353 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.8□□□□□ -0.2
SHC1P29353 AC005034.1-201ENST00000426657 489 ntBASIC13.8□□□□□ -0.2
SHC1P29353 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.8□□□□□ -0.2
SHC1P29353 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.8□□□□□ -0.2
SHC1P29353 AC093433.1-201ENST00000458048 571 ntBASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms