Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
ABCD3P28288 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.85□□□□□ -0.19
ABCD3P28288 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.85□□□□□ -0.19
ABCD3P28288 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ABCD3P28288 AC119751.2-201ENST00000504529 210 ntBASIC13.85□□□□□ -0.19
ABCD3P28288 FTLP10-202ENST00000505798 471 ntBASIC13.85□□□□□ -0.19
ABCD3P28288 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ABCD3P28288 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ABCD3P28288 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.85□□□□□ -0.19
ABCD3P28288 AC133552.6-201ENST00000613406 534 ntBASIC13.85□□□□□ -0.19
ABCD3P28288 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.85□□□□□ -0.19
ABCD3P28288 COX11-210ENST00000639671 696 ntBASIC13.85□□□□□ -0.19
ABCD3P28288 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.85□□□□□ -0.19
ABCD3P28288 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ABCD3P28288 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ABCD3P28288 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ABCD3P28288 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ABCD3P28288 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ABCD3P28288 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ABCD3P28288 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
ABCD3P28288 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.85□□□□□ -0.19
ABCD3P28288 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.85□□□□□ -0.19
ABCD3P28288 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ABCD3P28288 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
ABCD3P28288 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.85□□□□□ -0.19
ABCD3P28288 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
ABCD3P28288 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ABCD3P28288 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
ABCD3P28288 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.84□□□□□ -0.19
ABCD3P28288 FGD5P1-202ENST00000614866 2498 ntBASIC13.84□□□□□ -0.19
ABCD3P28288 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.84□□□□□ -0.19
ABCD3P28288 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ABCD3P28288 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.84□□□□□ -0.19
ABCD3P28288 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ABCD3P28288 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ABCD3P28288 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.84□□□□□ -0.19
ABCD3P28288 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ABCD3P28288 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.84□□□□□ -0.19
ABCD3P28288 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ABCD3P28288 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ABCD3P28288 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ABCD3P28288 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.84□□□□□ -0.19
ABCD3P28288 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ABCD3P28288 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.84□□□□□ -0.19
ABCD3P28288 AC026954.1-201ENST00000429771 1293 ntBASIC13.84□□□□□ -0.19
ABCD3P28288 AC007969.1-201ENST00000433675 447 ntBASIC13.84□□□□□ -0.19
ABCD3P28288 FAM8A4P-201ENST00000435433 1213 ntBASIC13.84□□□□□ -0.19
ABCD3P28288 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.84□□□□□ -0.19
ABCD3P28288 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.84□□□□□ -0.19
ABCD3P28288 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
ABCD3P28288 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ABCD3P28288 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.84□□□□□ -0.19
ABCD3P28288 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.84□□□□□ -0.19
ABCD3P28288 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.84□□□□□ -0.19
ABCD3P28288 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.84□□□□□ -0.19
ABCD3P28288 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ABCD3P28288 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ABCD3P28288 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ABCD3P28288 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.84□□□□□ -0.19
ABCD3P28288 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.84□□□□□ -0.19
ABCD3P28288 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
ABCD3P28288 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.84□□□□□ -0.19
ABCD3P28288 AHCYP2-201ENST00000430630 1300 ntBASIC13.84□□□□□ -0.19
ABCD3P28288 AC013726.1-201ENST00000563747 2285 ntBASIC13.84□□□□□ -0.19
ABCD3P28288 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ABCD3P28288 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ABCD3P28288 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ABCD3P28288 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ABCD3P28288 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
ABCD3P28288 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
ABCD3P28288 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
ABCD3P28288 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.19
ABCD3P28288 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.83□□□□□ -0.2
ABCD3P28288 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.83□□□□□ -0.2
ABCD3P28288 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ABCD3P28288 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ABCD3P28288 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ABCD3P28288 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ABCD3P28288 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ABCD3P28288 CICP23-201ENST00000605013 2741 ntBASIC13.83□□□□□ -0.2
ABCD3P28288 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.83□□□□□ -0.2
ABCD3P28288 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.83□□□□□ -0.2
ABCD3P28288 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ABCD3P28288 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ABCD3P28288 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.83□□□□□ -0.2
ABCD3P28288 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ABCD3P28288 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ABCD3P28288 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.83□□□□□ -0.2
ABCD3P28288 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ABCD3P28288 MIR1202-201ENST00000408529 83 ntBASIC13.83□□□□□ -0.2
ABCD3P28288 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ABCD3P28288 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.83□□□□□ -0.2
ABCD3P28288 TLE1P1-201ENST00000422965 589 ntBASIC13.83□□□□□ -0.2
ABCD3P28288 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ABCD3P28288 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
ABCD3P28288 KRT223P-202ENST00000449164 1292 ntBASIC13.83□□□□□ -0.2
ABCD3P28288 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.83□□□□□ -0.2
ABCD3P28288 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.83□□□□□ -0.2
ABCD3P28288 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ABCD3P28288 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms