Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC3P19447 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.38■□□□□ 0.37
ERCC3P19447 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC3P19447 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.38■□□□□ 0.37
ERCC3P19447 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.38■□□□□ 0.37
ERCC3P19447 AL161772.1-201ENST00000610494 4412 ntBASIC17.38■□□□□ 0.37
ERCC3P19447 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC3P19447 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC3P19447 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC3P19447 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC3P19447 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ERCC3P19447 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC3P19447 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.38■□□□□ 0.37
ERCC3P19447 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC3P19447 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC3P19447 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC3P19447 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC3P19447 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC3P19447 AL136309.1-201ENST00000403917 691 ntBASIC17.38■□□□□ 0.37
ERCC3P19447 RPL5P21-201ENST00000404620 815 ntBASIC17.38■□□□□ 0.37
ERCC3P19447 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.38■□□□□ 0.37
ERCC3P19447 AL354877.1-201ENST00000424412 413 ntBASIC17.38■□□□□ 0.37
ERCC3P19447 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC17.38■□□□□ 0.37
ERCC3P19447 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC3P19447 FTLP10-202ENST00000505798 471 ntBASIC17.38■□□□□ 0.37
ERCC3P19447 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.38■□□□□ 0.37
ERCC3P19447 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC3P19447 DUX4L47-201ENST00000566374 394 ntBASIC17.38■□□□□ 0.37
ERCC3P19447 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
ERCC3P19447 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.38■□□□□ 0.37
ERCC3P19447 AC016629.1-201ENST00000596579 586 ntBASIC17.38■□□□□ 0.37
ERCC3P19447 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC3P19447 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
ERCC3P19447 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC3P19447 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC3P19447 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC3P19447 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC3P19447 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ERCC3P19447 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC3P19447 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
ERCC3P19447 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC3P19447 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
ERCC3P19447 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC3P19447 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.37■□□□□ 0.37
ERCC3P19447 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.37■□□□□ 0.37
ERCC3P19447 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC3P19447 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC3P19447 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC3P19447 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.37■□□□□ 0.37
ERCC3P19447 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC3P19447 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC3P19447 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.37■□□□□ 0.37
ERCC3P19447 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC3P19447 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC3P19447 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC3P19447 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.37■□□□□ 0.37
ERCC3P19447 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC3P19447 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
ERCC3P19447 AC104457.1-201ENST00000401024 814 ntBASIC17.37■□□□□ 0.37
ERCC3P19447 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ERCC3P19447 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC3P19447 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC17.37■□□□□ 0.37
ERCC3P19447 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.37■□□□□ 0.37
ERCC3P19447 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC3P19447 RN7SL190P-201ENST00000582519 257 ntBASIC17.37■□□□□ 0.37
ERCC3P19447 AC015967.2-201ENST00000624092 234 ntBASIC17.37■□□□□ 0.37
ERCC3P19447 AC006435.4-201ENST00000625037 234 ntBASIC17.37■□□□□ 0.37
ERCC3P19447 AL356737.1-201ENST00000634391 234 ntBASIC17.37■□□□□ 0.37
ERCC3P19447 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC3P19447 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC3P19447 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.37■□□□□ 0.37
ERCC3P19447 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.37■□□□□ 0.37
ERCC3P19447 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC3P19447 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC3P19447 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC3P19447 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.37■□□□□ 0.37
ERCC3P19447 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC3P19447 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC3P19447 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC3P19447 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC3P19447 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC3P19447 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC3P19447 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.36■□□□□ 0.37
ERCC3P19447 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC17.36■□□□□ 0.37
ERCC3P19447 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC3P19447 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC3P19447 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC3P19447 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC3P19447 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ERCC3P19447 SPTLC1P5-201ENST00000450718 252 ntBASIC17.36■□□□□ 0.37
ERCC3P19447 MESTP3-201ENST00000503460 968 ntBASIC17.36■□□□□ 0.37
ERCC3P19447 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.36■□□□□ 0.37
ERCC3P19447 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.36■□□□□ 0.37
ERCC3P19447 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.36■□□□□ 0.37
ERCC3P19447 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC3P19447 COG4-212ENST00000564653 590 ntTSL 5 BASIC17.36■□□□□ 0.37
ERCC3P19447 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.36■□□□□ 0.37
ERCC3P19447 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC17.36■□□□□ 0.37
ERCC3P19447 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC17.36■□□□□ 0.37
ERCC3P19447 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms