Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.06■□□□□ 0.16
SYN1P17600 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.06■□□□□ 0.16
SYN1P17600 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYN1P17600 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYN1P17600 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.06■□□□□ 0.16
SYN1P17600 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYN1P17600 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYN1P17600 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.06■□□□□ 0.16
SYN1P17600 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.06■□□□□ 0.16
SYN1P17600 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SYN1P17600 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SYN1P17600 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SYN1P17600 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYN1P17600 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC16.05■□□□□ 0.16
SYN1P17600 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYN1P17600 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.05■□□□□ 0.16
SYN1P17600 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SYN1P17600 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYN1P17600 AL672207.1-201ENST00000328462 1570 ntBASIC16.05■□□□□ 0.16
SYN1P17600 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
SYN1P17600 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
SYN1P17600 AC003102.2-201ENST00000589195 1469 ntBASIC16.05■□□□□ 0.16
SYN1P17600 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SYN1P17600 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SYN1P17600 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SYN1P17600 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SYN1P17600 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYN1P17600 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.05■□□□□ 0.16
SYN1P17600 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SYN1P17600 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.05■□□□□ 0.16
SYN1P17600 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SYN1P17600 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC16.05■□□□□ 0.16
SYN1P17600 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SYN1P17600 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.05■□□□□ 0.16
SYN1P17600 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYN1P17600 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC16.05■□□□□ 0.16
SYN1P17600 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC16.05■□□□□ 0.16
SYN1P17600 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SYN1P17600 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC16.05■□□□□ 0.16
SYN1P17600 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC16.05■□□□□ 0.16
SYN1P17600 AL035414.1-201ENST00000451327 857 ntBASIC16.05■□□□□ 0.16
SYN1P17600 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SYN1P17600 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SYN1P17600 GDNF-207ENST00000515058 764 ntTSL 5 BASIC16.05■□□□□ 0.16
SYN1P17600 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.05■□□□□ 0.16
SYN1P17600 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
SYN1P17600 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC16.05■□□□□ 0.16
SYN1P17600 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SYN1P17600 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SYN1P17600 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SYN1P17600 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC16.05■□□□□ 0.16
SYN1P17600 MBP-238ENST00000580402 915 ntTSL 5 BASIC16.05■□□□□ 0.16
SYN1P17600 RPS5-204ENST00000598098 536 ntTSL 2 BASIC16.05■□□□□ 0.16
SYN1P17600 AL022334.2-201ENST00000610000 484 ntBASIC16.05■□□□□ 0.16
SYN1P17600 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.05■□□□□ 0.16
SYN1P17600 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYN1P17600 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYN1P17600 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.05■□□□□ 0.16
SYN1P17600 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.05■□□□□ 0.16
SYN1P17600 ZNF436-AS1-201ENST00000335648 2547 ntBASIC16.05■□□□□ 0.16
SYN1P17600 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.05■□□□□ 0.16
SYN1P17600 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SYN1P17600 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.05■□□□□ 0.16
SYN1P17600 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.05■□□□□ 0.16
SYN1P17600 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SYN1P17600 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYN1P17600 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYN1P17600 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
SYN1P17600 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SYN1P17600 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYN1P17600 AC099398.1-201ENST00000567919 2776 ntBASIC16.04■□□□□ 0.16
SYN1P17600 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYN1P17600 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYN1P17600 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYN1P17600 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYN1P17600 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYN1P17600 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYN1P17600 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.04■□□□□ 0.16
SYN1P17600 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYN1P17600 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYN1P17600 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.04■□□□□ 0.16
SYN1P17600 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYN1P17600 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYN1P17600 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYN1P17600 NHP2P1-201ENST00000335274 462 ntBASIC16.04■□□□□ 0.16
SYN1P17600 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYN1P17600 RPL5P21-201ENST00000404620 815 ntBASIC16.04■□□□□ 0.16
SYN1P17600 HLA-DPA2-205ENST00000433582 733 ntBASIC16.04■□□□□ 0.16
SYN1P17600 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYN1P17600 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC16.04■□□□□ 0.16
SYN1P17600 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SYN1P17600 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC16.04■□□□□ 0.16
SYN1P17600 AC026470.1-201ENST00000478038 846 ntBASIC16.04■□□□□ 0.16
SYN1P17600 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC16.04■□□□□ 0.16
SYN1P17600 AC226150.1-201ENST00000544259 466 ntBASIC16.04■□□□□ 0.16
SYN1P17600 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC16.04■□□□□ 0.16
SYN1P17600 GOLGA2P7-209ENST00000560408 745 ntBASIC16.04■□□□□ 0.16
SYN1P17600 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
SYN1P17600 AC010976.2-201ENST00000609697 852 ntBASIC16.04■□□□□ 0.16
SYN1P17600 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms