Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HIST1H1DP16402 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HIST1H1DP16402 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.77□□□□□ -0.36
HIST1H1DP16402 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HIST1H1DP16402 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
HIST1H1DP16402 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
HIST1H1DP16402 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H1DP16402 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
HIST1H1DP16402 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
HIST1H1DP16402 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H1DP16402 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H1DP16402 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H1DP16402 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC12.77□□□□□ -0.37
HIST1H1DP16402 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.77□□□□□ -0.37
HIST1H1DP16402 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
HIST1H1DP16402 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.77□□□□□ -0.37
HIST1H1DP16402 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.77□□□□□ -0.37
HIST1H1DP16402 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.77□□□□□ -0.37
HIST1H1DP16402 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.77□□□□□ -0.37
HIST1H1DP16402 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC12.77□□□□□ -0.37
HIST1H1DP16402 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC12.77□□□□□ -0.37
HIST1H1DP16402 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.77□□□□□ -0.37
HIST1H1DP16402 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.77□□□□□ -0.37
HIST1H1DP16402 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.77□□□□□ -0.37
HIST1H1DP16402 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.77□□□□□ -0.37
HIST1H1DP16402 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H1DP16402 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
HIST1H1DP16402 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H1DP16402 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H1DP16402 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H1DP16402 AC093525.8-201ENST00000624099 1342 ntBASIC12.77□□□□□ -0.37
HIST1H1DP16402 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H1DP16402 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H1DP16402 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
HIST1H1DP16402 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.77□□□□□ -0.37
HIST1H1DP16402 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H1DP16402 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H1DP16402 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.77□□□□□ -0.37
HIST1H1DP16402 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H1DP16402 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H1DP16402 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H1DP16402 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.77□□□□□ -0.37
HIST1H1DP16402 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.77□□□□□ -0.37
HIST1H1DP16402 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H1DP16402 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
HIST1H1DP16402 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
HIST1H1DP16402 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H1DP16402 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.77□□□□□ -0.37
HIST1H1DP16402 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H1DP16402 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.77□□□□□ -0.37
HIST1H1DP16402 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
HIST1H1DP16402 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H1DP16402 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H1DP16402 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H1DP16402 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1DP16402 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1DP16402 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1DP16402 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.76□□□□□ -0.37
HIST1H1DP16402 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1DP16402 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1DP16402 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1DP16402 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1DP16402 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
HIST1H1DP16402 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1DP16402 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
HIST1H1DP16402 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.76□□□□□ -0.37
HIST1H1DP16402 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1DP16402 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1DP16402 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1DP16402 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1DP16402 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.76□□□□□ -0.37
HIST1H1DP16402 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1DP16402 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1DP16402 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.76□□□□□ -0.37
HIST1H1DP16402 AL645937.2-201ENST00000396808 931 ntBASIC12.76□□□□□ -0.37
HIST1H1DP16402 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1DP16402 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.76□□□□□ -0.37
HIST1H1DP16402 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1DP16402 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC12.76□□□□□ -0.37
HIST1H1DP16402 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.76□□□□□ -0.37
HIST1H1DP16402 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.76□□□□□ -0.37
HIST1H1DP16402 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.76□□□□□ -0.37
HIST1H1DP16402 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1DP16402 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
HIST1H1DP16402 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1DP16402 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.76□□□□□ -0.37
HIST1H1DP16402 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.76□□□□□ -0.37
HIST1H1DP16402 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1DP16402 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
HIST1H1DP16402 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.76□□□□□ -0.37
HIST1H1DP16402 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1DP16402 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
HIST1H1DP16402 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
HIST1H1DP16402 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1DP16402 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
HIST1H1DP16402 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1DP16402 KRT8P24-201ENST00000560290 1559 ntBASIC12.76□□□□□ -0.37
HIST1H1DP16402 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1DP16402 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.76□□□□□ -0.37
HIST1H1DP16402 AL158070.2-201ENST00000623713 1621 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms