Protein–RNA interactions for Protein: P11047

LAMC1, Laminin subunit gamma-1, humanhuman

Predictions only

Length 1,609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMC1P11047 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC20.72■□□□□ 0.91
LAMC1P11047 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LAMC1P11047 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LAMC1P11047 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LAMC1P11047 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LAMC1P11047 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
LAMC1P11047 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
LAMC1P11047 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LAMC1P11047 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
LAMC1P11047 JTB-202ENST00000356648 1040 ntTSL 2 BASIC20.71■□□□□ 0.91
LAMC1P11047 SOD2-202ENST00000367054 815 ntTSL 2 BASIC20.71■□□□□ 0.91
LAMC1P11047 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
LAMC1P11047 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LAMC1P11047 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LAMC1P11047 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LAMC1P11047 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LAMC1P11047 NAT9-220ENST00000582870 896 ntTSL 5 BASIC20.71■□□□□ 0.91
LAMC1P11047 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC20.71■□□□□ 0.91
LAMC1P11047 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC20.71■□□□□ 0.91
LAMC1P11047 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
LAMC1P11047 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC20.71■□□□□ 0.91
LAMC1P11047 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LAMC1P11047 TNRC18P2-201ENST00000417666 2714 ntBASIC20.71■□□□□ 0.91
LAMC1P11047 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LAMC1P11047 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LAMC1P11047 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
LAMC1P11047 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC20.71■□□□□ 0.91
LAMC1P11047 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LAMC1P11047 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC20.71■□□□□ 0.91
LAMC1P11047 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC20.71■□□□□ 0.91
LAMC1P11047 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LAMC1P11047 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
LAMC1P11047 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC20.71■□□□□ 0.91
LAMC1P11047 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
LAMC1P11047 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC20.71■□□□□ 0.91
LAMC1P11047 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LAMC1P11047 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LAMC1P11047 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LAMC1P11047 MIR1227-201ENST00000408484 88 ntBASIC20.71■□□□□ 0.91
LAMC1P11047 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LAMC1P11047 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC20.71■□□□□ 0.91
LAMC1P11047 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC20.71■□□□□ 0.91
LAMC1P11047 RPL18AP3-201ENST00000462885 528 ntBASIC20.71■□□□□ 0.91
LAMC1P11047 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LAMC1P11047 AL031713.1-201ENST00000564813 661 ntBASIC20.71■□□□□ 0.91
LAMC1P11047 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC20.71■□□□□ 0.91
LAMC1P11047 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
LAMC1P11047 AC009145.4-201ENST00000625119 1294 ntBASIC20.71■□□□□ 0.91
LAMC1P11047 CICP24-201ENST00000605464 2705 ntBASIC20.71■□□□□ 0.91
LAMC1P11047 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
LAMC1P11047 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
LAMC1P11047 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.91
LAMC1P11047 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC20.7■□□□□ 0.9
LAMC1P11047 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC20.7■□□□□ 0.9
LAMC1P11047 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LAMC1P11047 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LAMC1P11047 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC20.7■□□□□ 0.9
LAMC1P11047 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
LAMC1P11047 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC20.7■□□□□ 0.9
LAMC1P11047 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC20.7■□□□□ 0.9
LAMC1P11047 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LAMC1P11047 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC20.7■□□□□ 0.9
LAMC1P11047 AC130709.1-201ENST00000484779 1212 ntBASIC20.7■□□□□ 0.9
LAMC1P11047 AP002803.1-201ENST00000528836 498 ntBASIC20.7■□□□□ 0.9
LAMC1P11047 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
LAMC1P11047 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LAMC1P11047 AC008741.2-201ENST00000612792 3115 ntBASIC20.7■□□□□ 0.9
LAMC1P11047 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
LAMC1P11047 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LAMC1P11047 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC20.69■□□□□ 0.9
LAMC1P11047 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LAMC1P11047 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LAMC1P11047 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
LAMC1P11047 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LAMC1P11047 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LAMC1P11047 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LAMC1P11047 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC20.69■□□□□ 0.9
LAMC1P11047 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
LAMC1P11047 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LAMC1P11047 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LAMC1P11047 AL583805.1-201ENST00000391389 531 ntBASIC20.69■□□□□ 0.9
LAMC1P11047 RPS9P1-201ENST00000419943 583 ntBASIC20.69■□□□□ 0.9
LAMC1P11047 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC20.69■□□□□ 0.9
LAMC1P11047 FTH1P22-201ENST00000456305 520 ntBASIC20.69■□□□□ 0.9
LAMC1P11047 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC20.69■□□□□ 0.9
LAMC1P11047 RN7SL81P-201ENST00000493781 261 ntBASIC20.69■□□□□ 0.9
LAMC1P11047 ORAOV1P1-201ENST00000503108 395 ntBASIC20.69■□□□□ 0.9
LAMC1P11047 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LAMC1P11047 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC20.69■□□□□ 0.9
LAMC1P11047 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC20.69■□□□□ 0.9
LAMC1P11047 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC20.69■□□□□ 0.9
LAMC1P11047 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC20.69■□□□□ 0.9
LAMC1P11047 AC007718.1-201ENST00000621078 280 ntBASIC20.69■□□□□ 0.9
LAMC1P11047 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC20.69■□□□□ 0.9
LAMC1P11047 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LAMC1P11047 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LAMC1P11047 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LAMC1P11047 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.69■□□□□ 0.9
LAMC1P11047 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LAMC1P11047 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms