Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 PRAL-201ENST00000624952 3286 ntBASIC9.01□□□□□ -0.97
APOBP04114 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC9.01□□□□□ -0.97
APOBP04114 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
APOBP04114 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC9.01□□□□□ -0.97
APOBP04114 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
APOBP04114 GNG10P1-201ENST00000452289 199 ntBASIC9.01□□□□□ -0.97
APOBP04114 RN7SL556P-201ENST00000582856 298 ntBASIC9.01□□□□□ -0.97
APOBP04114 AC026336.4-201ENST00000624565 1050 ntBASIC9.01□□□□□ -0.97
APOBP04114 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC9.01□□□□□ -0.97
APOBP04114 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
APOBP04114 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
APOBP04114 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC9.01□□□□□ -0.97
APOBP04114 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC9.01□□□□□ -0.97
APOBP04114 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
APOBP04114 CELP-203ENST00000624767 2414 ntTSL 5 BASIC9.01□□□□□ -0.97
APOBP04114 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
APOBP04114 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
APOBP04114 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
APOBP04114 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
APOBP04114 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC9□□□□□ -0.97
APOBP04114 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
APOBP04114 LINC00265-2P-201ENST00000413372 782 ntBASIC9□□□□□ -0.97
APOBP04114 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
APOBP04114 AL512599.1-201ENST00000430724 685 ntBASIC9□□□□□ -0.97
APOBP04114 ST13P19-201ENST00000442505 1124 ntBASIC9□□□□□ -0.97
APOBP04114 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC9□□□□□ -0.97
APOBP04114 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC9□□□□□ -0.97
APOBP04114 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC9□□□□□ -0.97
APOBP04114 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC9□□□□□ -0.97
APOBP04114 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC9□□□□□ -0.97
APOBP04114 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC9□□□□□ -0.97
APOBP04114 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
APOBP04114 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
APOBP04114 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
APOBP04114 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
APOBP04114 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC9□□□□□ -0.97
APOBP04114 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC9□□□□□ -0.97
APOBP04114 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
APOBP04114 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
APOBP04114 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
APOBP04114 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
APOBP04114 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC9□□□□□ -0.97
APOBP04114 PIFO-201ENST00000369737 746 ntTSL 2 BASIC9□□□□□ -0.97
APOBP04114 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
APOBP04114 LINP1-201ENST00000417112 917 ntTSL 2 BASIC9□□□□□ -0.97
APOBP04114 AC073869.2-201ENST00000417338 1026 ntBASIC9□□□□□ -0.97
APOBP04114 KRT18P4-201ENST00000422599 1288 ntBASIC9□□□□□ -0.97
APOBP04114 CDCA4P4-201ENST00000435216 680 ntBASIC9□□□□□ -0.97
APOBP04114 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC9□□□□□ -0.97
APOBP04114 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC9□□□□□ -0.97
APOBP04114 BMF-206ENST00000558774 671 ntTSL 3 BASIC9□□□□□ -0.97
APOBP04114 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
APOBP04114 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
APOBP04114 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC9□□□□□ -0.97
APOBP04114 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
APOBP04114 AC020931.1-201ENST00000589622 1346 ntBASIC9□□□□□ -0.97
APOBP04114 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC9□□□□□ -0.97
APOBP04114 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC9□□□□□ -0.97
APOBP04114 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
APOBP04114 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
APOBP04114 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC9□□□□□ -0.97
APOBP04114 BX088651.3-201ENST00000418155 352 ntBASIC9□□□□□ -0.97
APOBP04114 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC9□□□□□ -0.97
APOBP04114 GAS5-209ENST00000430245 723 ntTSL 3 BASIC9□□□□□ -0.97
APOBP04114 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
APOBP04114 PRSS3P1-201ENST00000503996 742 ntBASIC9□□□□□ -0.97
APOBP04114 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC9□□□□□ -0.97
APOBP04114 KNOP1P1-201ENST00000542108 989 ntBASIC9□□□□□ -0.97
APOBP04114 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC9□□□□□ -0.97
APOBP04114 RN7SL300P-201ENST00000582522 318 ntBASIC9□□□□□ -0.97
APOBP04114 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC9□□□□□ -0.97
APOBP04114 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC9□□□□□ -0.97
APOBP04114 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC9□□□□□ -0.97
APOBP04114 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC9□□□□□ -0.97
APOBP04114 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC9□□□□□ -0.97
APOBP04114 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
APOBP04114 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
APOBP04114 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC9□□□□□ -0.97
APOBP04114 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
APOBP04114 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC9□□□□□ -0.97
APOBP04114 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
APOBP04114 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
APOBP04114 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC9□□□□□ -0.97
APOBP04114 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC9□□□□□ -0.97
APOBP04114 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
APOBP04114 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC9□□□□□ -0.97
APOBP04114 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC9□□□□□ -0.97
APOBP04114 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC9□□□□□ -0.97
APOBP04114 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC9□□□□□ -0.97
APOBP04114 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC9□□□□□ -0.97
APOBP04114 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
APOBP04114 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC9□□□□□ -0.97
APOBP04114 HINT1-205ENST00000508488 703 ntTSL 2 BASIC9□□□□□ -0.97
APOBP04114 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC9□□□□□ -0.97
APOBP04114 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC9□□□□□ -0.97
APOBP04114 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC9□□□□□ -0.97
APOBP04114 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
APOBP04114 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC9□□□□□ -0.97
APOBP04114 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC9□□□□□ -0.97
APOBP04114 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms