Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
TRGV3P03979 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV3P03979 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC11.87□□□□□ -0.51
TRGV3P03979 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
TRGV3P03979 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV3P03979 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.51
TRGV3P03979 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
TRGV3P03979 CICP24-201ENST00000605464 2705 ntBASIC11.87□□□□□ -0.51
TRGV3P03979 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV3P03979 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC11.87□□□□□ -0.51
TRGV3P03979 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC11.87□□□□□ -0.51
TRGV3P03979 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV3P03979 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV3P03979 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
TRGV3P03979 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC11.87□□□□□ -0.51
TRGV3P03979 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC11.87□□□□□ -0.51
TRGV3P03979 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC11.87□□□□□ -0.51
TRGV3P03979 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV3P03979 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
TRGV3P03979 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC11.87□□□□□ -0.51
TRGV3P03979 AC005034.1-201ENST00000426657 489 ntBASIC11.87□□□□□ -0.51
TRGV3P03979 GSAP-205ENST00000430584 600 ntTSL 5 BASIC11.87□□□□□ -0.51
TRGV3P03979 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV3P03979 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV3P03979 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC11.87□□□□□ -0.51
TRGV3P03979 AC012441.1-201ENST00000446669 685 ntBASIC11.87□□□□□ -0.51
TRGV3P03979 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC11.87□□□□□ -0.51
TRGV3P03979 GIMAP3P-201ENST00000495150 836 ntBASIC11.87□□□□□ -0.51
TRGV3P03979 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
TRGV3P03979 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
TRGV3P03979 RBM7-207ENST00000544582 692 ntTSL 3 BASIC11.87□□□□□ -0.51
TRGV3P03979 CR383656.12-201ENST00000549567 513 ntBASIC11.87□□□□□ -0.51
TRGV3P03979 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC11.87□□□□□ -0.51
TRGV3P03979 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
TRGV3P03979 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC11.87□□□□□ -0.51
TRGV3P03979 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC11.87□□□□□ -0.51
TRGV3P03979 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC11.87□□□□□ -0.51
TRGV3P03979 IGHV3-72-202ENST00000621503 303 ntBASIC11.87□□□□□ -0.51
TRGV3P03979 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV3P03979 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
TRGV3P03979 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV3P03979 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
TRGV3P03979 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC11.87□□□□□ -0.51
TRGV3P03979 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV3P03979 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
TRGV3P03979 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV3P03979 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV3P03979 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
TRGV3P03979 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC11.87□□□□□ -0.51
TRGV3P03979 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC11.87□□□□□ -0.51
TRGV3P03979 AC106881.1-201ENST00000605849 3329 ntBASIC11.87□□□□□ -0.51
TRGV3P03979 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV3P03979 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC11.87□□□□□ -0.51
TRGV3P03979 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV3P03979 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
TRGV3P03979 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV3P03979 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV3P03979 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV3P03979 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV3P03979 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC11.87□□□□□ -0.51
TRGV3P03979 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
TRGV3P03979 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV3P03979 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV3P03979 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC11.87□□□□□ -0.51
TRGV3P03979 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV3P03979 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV3P03979 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV3P03979 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV3P03979 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV3P03979 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV3P03979 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC11.86□□□□□ -0.51
TRGV3P03979 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV3P03979 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
TRGV3P03979 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV3P03979 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV3P03979 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV3P03979 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV3P03979 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC11.86□□□□□ -0.51
TRGV3P03979 GSN-215ENST00000545652 2428 ntTSL 2 BASIC11.86□□□□□ -0.51
TRGV3P03979 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV3P03979 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC11.86□□□□□ -0.51
TRGV3P03979 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
TRGV3P03979 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV3P03979 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV3P03979 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
TRGV3P03979 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
TRGV3P03979 ACTBP8-201ENST00000403258 1108 ntBASIC11.86□□□□□ -0.51
TRGV3P03979 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC11.86□□□□□ -0.51
TRGV3P03979 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
TRGV3P03979 HLA-K-203ENST00000430151 1046 ntBASIC11.86□□□□□ -0.51
TRGV3P03979 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV3P03979 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC11.86□□□□□ -0.51
TRGV3P03979 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC11.86□□□□□ -0.51
TRGV3P03979 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC11.86□□□□□ -0.51
TRGV3P03979 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV3P03979 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV3P03979 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV3P03979 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC11.86□□□□□ -0.51
TRGV3P03979 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
TRGV3P03979 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms