Protein–RNA interactions for Protein: P01911

HLA-DRB1, HLA class II histocompatibility antigen, DRB1-15 beta chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1P01911 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.12□□□□□ -0.47
HLA-DRB1P01911 AL603764.1-201ENST00000636452 321 ntBASIC12.12□□□□□ -0.47
HLA-DRB1P01911 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
HLA-DRB1P01911 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB1P01911 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB1P01911 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
HLA-DRB1P01911 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB1P01911 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
HLA-DRB1P01911 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB1P01911 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.12□□□□□ -0.47
HLA-DRB1P01911 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB1P01911 LINC00528-201ENST00000600723 2160 ntBASIC12.12□□□□□ -0.47
HLA-DRB1P01911 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB1P01911 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB1P01911 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.12□□□□□ -0.47
HLA-DRB1P01911 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
HLA-DRB1P01911 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB1P01911 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB1P01911 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
HLA-DRB1P01911 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB1P01911 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB1P01911 KRT8P14-201ENST00000414254 1442 ntBASIC12.11□□□□□ -0.47
HLA-DRB1P01911 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 CU639417.3-201ENST00000624240 1404 ntBASIC12.11□□□□□ -0.47
HLA-DRB1P01911 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 REXO1L2P-201ENST00000425429 2069 ntBASIC12.11□□□□□ -0.47
HLA-DRB1P01911 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.11□□□□□ -0.47
HLA-DRB1P01911 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 POLE2-203ENST00000553805 496 ntTSL 2 BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 AL596325.1-201ENST00000563991 1082 ntBASIC12.11□□□□□ -0.47
HLA-DRB1P01911 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.11□□□□□ -0.47
HLA-DRB1P01911 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB1P01911 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms