Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 PMP22-202ENST00000395936 816 ntTSL 3 BASIC12.75□□□□□ -0.37
HLA-AP01891 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC12.75□□□□□ -0.37
HLA-AP01891 SYS1-203ENST00000414310 795 ntTSL 3 BASIC12.75□□□□□ -0.37
HLA-AP01891 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-AP01891 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-AP01891 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
HLA-AP01891 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
HLA-AP01891 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC12.75□□□□□ -0.37
HLA-AP01891 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC12.75□□□□□ -0.37
HLA-AP01891 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.75□□□□□ -0.37
HLA-AP01891 AC112191.1-201ENST00000523689 701 ntBASIC12.75□□□□□ -0.37
HLA-AP01891 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.75□□□□□ -0.37
HLA-AP01891 KRT8P24-201ENST00000560290 1559 ntBASIC12.75□□□□□ -0.37
HLA-AP01891 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-AP01891 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.75□□□□□ -0.37
HLA-AP01891 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC12.75□□□□□ -0.37
HLA-AP01891 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC12.75□□□□□ -0.37
HLA-AP01891 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC12.75□□□□□ -0.37
HLA-AP01891 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.75□□□□□ -0.37
HLA-AP01891 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.75□□□□□ -0.37
HLA-AP01891 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-AP01891 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
HLA-AP01891 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
HLA-AP01891 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-AP01891 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.75□□□□□ -0.37
HLA-AP01891 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-AP01891 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.75□□□□□ -0.37
HLA-AP01891 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-AP01891 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.74□□□□□ -0.37
HLA-AP01891 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.74□□□□□ -0.37
HLA-AP01891 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.74□□□□□ -0.37
HLA-AP01891 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-AP01891 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-AP01891 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
HLA-AP01891 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-AP01891 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-AP01891 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-AP01891 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.74□□□□□ -0.37
HLA-AP01891 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-AP01891 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.74□□□□□ -0.37
HLA-AP01891 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-AP01891 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-AP01891 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.74□□□□□ -0.37
HLA-AP01891 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-AP01891 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-AP01891 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
HLA-AP01891 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-AP01891 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
HLA-AP01891 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-AP01891 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-AP01891 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
HLA-AP01891 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
HLA-AP01891 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.74□□□□□ -0.37
HLA-AP01891 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
HLA-AP01891 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-AP01891 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-AP01891 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-AP01891 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-AP01891 CD82-202ENST00000342935 967 ntTSL 5 BASIC12.74□□□□□ -0.37
HLA-AP01891 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-AP01891 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-AP01891 YBX2P1-201ENST00000394192 760 ntBASIC12.74□□□□□ -0.37
HLA-AP01891 AC002056.1-201ENST00000395613 760 ntBASIC12.74□□□□□ -0.37
HLA-AP01891 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.74□□□□□ -0.37
HLA-AP01891 PP14571-201ENST00000404327 934 ntTSL 2 BASIC12.74□□□□□ -0.37
HLA-AP01891 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.74□□□□□ -0.37
HLA-AP01891 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC12.74□□□□□ -0.37
HLA-AP01891 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.74□□□□□ -0.37
HLA-AP01891 ALG1L5P-201ENST00000482043 771 ntBASIC12.74□□□□□ -0.37
HLA-AP01891 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.74□□□□□ -0.37
HLA-AP01891 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC12.74□□□□□ -0.37
HLA-AP01891 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC12.74□□□□□ -0.37
HLA-AP01891 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.74□□□□□ -0.37
HLA-AP01891 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.74□□□□□ -0.37
HLA-AP01891 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.74□□□□□ -0.37
HLA-AP01891 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC12.74□□□□□ -0.37
HLA-AP01891 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC12.74□□□□□ -0.37
HLA-AP01891 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC12.74□□□□□ -0.37
HLA-AP01891 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC12.74□□□□□ -0.37
HLA-AP01891 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.74□□□□□ -0.37
HLA-AP01891 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
HLA-AP01891 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-AP01891 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.74□□□□□ -0.37
HLA-AP01891 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.74□□□□□ -0.37
HLA-AP01891 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-AP01891 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.74□□□□□ -0.37
HLA-AP01891 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-AP01891 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-AP01891 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-AP01891 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.74□□□□□ -0.37
HLA-AP01891 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-AP01891 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-AP01891 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-AP01891 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
HLA-AP01891 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
HLA-AP01891 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-AP01891 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.74□□□□□ -0.37
HLA-AP01891 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
HLA-AP01891 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
HLA-AP01891 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms