Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CD4P01730 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.47■□□□□ 0.23
CD4P01730 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.47■□□□□ 0.23
CD4P01730 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD4P01730 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CD4P01730 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CD4P01730 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.47■□□□□ 0.23
CD4P01730 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.47■□□□□ 0.23
CD4P01730 PAUPAR-201ENST00000630360 2965 ntBASIC16.47■□□□□ 0.23
CD4P01730 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD4P01730 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD4P01730 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD4P01730 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.46■□□□□ 0.23
CD4P01730 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.46■□□□□ 0.23
CD4P01730 AC006058.4-201ENST00000624016 1670 ntBASIC16.46■□□□□ 0.23
CD4P01730 FLJ16779-201ENST00000612722 7638 ntBASIC16.46■□□□□ 0.23
CD4P01730 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD4P01730 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD4P01730 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.46■□□□□ 0.23
CD4P01730 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD4P01730 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.46■□□□□ 0.23
CD4P01730 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.46■□□□□ 0.23
CD4P01730 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.46■□□□□ 0.23
CD4P01730 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
CD4P01730 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD4P01730 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.46■□□□□ 0.23
CD4P01730 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC16.46■□□□□ 0.23
CD4P01730 RN7SL8P-201ENST00000461771 266 ntBASIC16.46■□□□□ 0.23
CD4P01730 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC16.46■□□□□ 0.23
CD4P01730 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD4P01730 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC16.46■□□□□ 0.23
CD4P01730 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CD4P01730 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.46■□□□□ 0.23
CD4P01730 MIR6842-201ENST00000612539 65 ntBASIC16.46■□□□□ 0.23
CD4P01730 WT1-AS_6.1-201ENST00000614919 121 ntBASIC16.46■□□□□ 0.23
CD4P01730 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.46■□□□□ 0.23
CD4P01730 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.46■□□□□ 0.23
CD4P01730 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.23
CD4P01730 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CD4P01730 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CD4P01730 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CD4P01730 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD4P01730 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.46■□□□□ 0.23
CD4P01730 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.46■□□□□ 0.23
CD4P01730 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD4P01730 AC012508.2-201ENST00000567613 1472 ntBASIC16.46■□□□□ 0.23
CD4P01730 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.46■□□□□ 0.23
CD4P01730 AC136621.1-201ENST00000624017 2304 ntBASIC16.46■□□□□ 0.23
CD4P01730 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
CD4P01730 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
CD4P01730 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CD4P01730 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
CD4P01730 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CD4P01730 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CD4P01730 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CD4P01730 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CD4P01730 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.45■□□□□ 0.22
CD4P01730 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CD4P01730 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD4P01730 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD4P01730 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD4P01730 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CD4P01730 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD4P01730 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD4P01730 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD4P01730 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.45■□□□□ 0.22
CD4P01730 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD4P01730 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CD4P01730 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CD4P01730 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD4P01730 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.45■□□□□ 0.22
CD4P01730 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD4P01730 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD4P01730 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD4P01730 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CD4P01730 AC008741.2-201ENST00000612792 3115 ntBASIC16.45■□□□□ 0.22
CD4P01730 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CD4P01730 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CD4P01730 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
CD4P01730 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC16.45■□□□□ 0.22
CD4P01730 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.45■□□□□ 0.22
CD4P01730 OR2K2-202ENST00000374428 1038 ntBASIC16.45■□□□□ 0.22
CD4P01730 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD4P01730 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD4P01730 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.45■□□□□ 0.22
CD4P01730 AC078875.1-201ENST00000431907 724 ntBASIC16.45■□□□□ 0.22
CD4P01730 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC16.45■□□□□ 0.22
CD4P01730 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC16.45■□□□□ 0.22
CD4P01730 RN7SL818P-201ENST00000485099 259 ntBASIC16.45■□□□□ 0.22
CD4P01730 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CD4P01730 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CD4P01730 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC16.45■□□□□ 0.22
CD4P01730 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.45■□□□□ 0.22
CD4P01730 AC005962.1-201ENST00000584100 773 ntBASIC16.45■□□□□ 0.22
CD4P01730 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.45■□□□□ 0.22
CD4P01730 AC138894.2-201ENST00000602838 371 ntBASIC16.45■□□□□ 0.22
CD4P01730 RN7SL725P-201ENST00000606439 259 ntBASIC16.45■□□□□ 0.22
CD4P01730 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD4P01730 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CD4P01730 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms