Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
TNFP01375 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TNFP01375 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TNFP01375 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TNFP01375 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TNFP01375 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TNFP01375 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TNFP01375 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.58□□□□□ -0.08
TNFP01375 PPT1-215ENST00000641471 2368 ntBASIC14.58□□□□□ -0.08
TNFP01375 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.58□□□□□ -0.08
TNFP01375 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TNFP01375 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.58□□□□□ -0.08
TNFP01375 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TNFP01375 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.58□□□□□ -0.08
TNFP01375 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TNFP01375 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.58□□□□□ -0.08
TNFP01375 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.58□□□□□ -0.08
TNFP01375 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.58□□□□□ -0.08
TNFP01375 AC104073.2-201ENST00000453737 312 ntBASIC14.58□□□□□ -0.08
TNFP01375 IGHJ2P-201ENST00000454480 60 ntBASIC14.58□□□□□ -0.08
TNFP01375 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.58□□□□□ -0.08
TNFP01375 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.58□□□□□ -0.08
TNFP01375 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.58□□□□□ -0.08
TNFP01375 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.58□□□□□ -0.08
TNFP01375 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.58□□□□□ -0.08
TNFP01375 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.58□□□□□ -0.08
TNFP01375 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TNFP01375 MIR4783-201ENST00000580343 82 ntBASIC14.58□□□□□ -0.08
TNFP01375 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TNFP01375 AC005324.6-201ENST00000587972 613 ntBASIC14.58□□□□□ -0.08
TNFP01375 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TNFP01375 AC027601.3-201ENST00000622907 509 ntBASIC14.58□□□□□ -0.08
TNFP01375 AC068587.10-201ENST00000641210 219 ntBASIC14.58□□□□□ -0.08
TNFP01375 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TNFP01375 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.58□□□□□ -0.08
TNFP01375 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TNFP01375 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TNFP01375 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.58□□□□□ -0.08
TNFP01375 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.58□□□□□ -0.08
TNFP01375 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TNFP01375 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
TNFP01375 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.58□□□□□ -0.08
TNFP01375 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
TNFP01375 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TNFP01375 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TNFP01375 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.58□□□□□ -0.08
TNFP01375 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TNFP01375 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TNFP01375 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TNFP01375 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TNFP01375 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFP01375 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TNFP01375 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFP01375 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFP01375 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFP01375 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.57□□□□□ -0.08
TNFP01375 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TNFP01375 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TNFP01375 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TNFP01375 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFP01375 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFP01375 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TNFP01375 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFP01375 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.57□□□□□ -0.08
TNFP01375 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.57□□□□□ -0.08
TNFP01375 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFP01375 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.57□□□□□ -0.08
TNFP01375 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TNFP01375 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFP01375 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFP01375 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
TNFP01375 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFP01375 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFP01375 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFP01375 MYO15B-237ENST00000642007 4893 ntBASIC14.57□□□□□ -0.08
TNFP01375 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TNFP01375 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.57□□□□□ -0.08
TNFP01375 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TNFP01375 AC011742.3-201ENST00000439053 820 ntBASIC14.57□□□□□ -0.08
TNFP01375 AC012441.2-201ENST00000444843 739 ntBASIC14.57□□□□□ -0.08
TNFP01375 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.57□□□□□ -0.08
TNFP01375 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.57□□□□□ -0.08
TNFP01375 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.57□□□□□ -0.08
TNFP01375 AC013355.1-201ENST00000562625 723 ntBASIC14.57□□□□□ -0.08
TNFP01375 AC132192.2-201ENST00000596206 1147 ntBASIC14.57□□□□□ -0.08
TNFP01375 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.57□□□□□ -0.08
TNFP01375 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
TNFP01375 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TNFP01375 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.57□□□□□ -0.08
TNFP01375 AL109954.1-202ENST00000564051 2148 ntBASIC14.57□□□□□ -0.08
TNFP01375 AC105917.1-201ENST00000506637 2539 ntBASIC14.57□□□□□ -0.08
TNFP01375 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TNFP01375 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFP01375 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFP01375 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.57□□□□□ -0.08
TNFP01375 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
TNFP01375 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFP01375 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFP01375 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.57□□□□□ -0.08
TNFP01375 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms