Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SH2D1AO60880 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SH2D1AO60880 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC11.28□□□□□ -0.6
SH2D1AO60880 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SH2D1AO60880 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SH2D1AO60880 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SH2D1AO60880 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC11.28□□□□□ -0.6
SH2D1AO60880 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC11.28□□□□□ -0.6
SH2D1AO60880 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SH2D1AO60880 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SH2D1AO60880 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SH2D1AO60880 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SH2D1AO60880 AGGF1P1-201ENST00000509500 2073 ntBASIC11.28□□□□□ -0.6
SH2D1AO60880 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
SH2D1AO60880 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
SH2D1AO60880 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
SH2D1AO60880 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.6
SH2D1AO60880 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
SH2D1AO60880 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
SH2D1AO60880 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
SH2D1AO60880 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
SH2D1AO60880 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC11.27□□□□□ -0.6
SH2D1AO60880 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
SH2D1AO60880 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SH2D1AO60880 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
SH2D1AO60880 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC11.27□□□□□ -0.6
SH2D1AO60880 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
SH2D1AO60880 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC11.27□□□□□ -0.6
SH2D1AO60880 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
SH2D1AO60880 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SH2D1AO60880 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SH2D1AO60880 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC11.27□□□□□ -0.61
SH2D1AO60880 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SH2D1AO60880 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SH2D1AO60880 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SH2D1AO60880 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
SH2D1AO60880 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SH2D1AO60880 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
SH2D1AO60880 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SH2D1AO60880 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SH2D1AO60880 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SH2D1AO60880 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC11.27□□□□□ -0.61
SH2D1AO60880 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
SH2D1AO60880 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SH2D1AO60880 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SH2D1AO60880 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
SH2D1AO60880 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SH2D1AO60880 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SH2D1AO60880 MCCD1P2-201ENST00000423228 335 ntBASIC11.27□□□□□ -0.61
SH2D1AO60880 FAM58DP-201ENST00000428076 619 ntBASIC11.27□□□□□ -0.61
SH2D1AO60880 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC11.27□□□□□ -0.61
SH2D1AO60880 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC11.27□□□□□ -0.61
SH2D1AO60880 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC11.27□□□□□ -0.61
SH2D1AO60880 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SH2D1AO60880 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
SH2D1AO60880 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC11.27□□□□□ -0.61
SH2D1AO60880 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC11.27□□□□□ -0.61
SH2D1AO60880 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC11.27□□□□□ -0.61
SH2D1AO60880 LINC01115-203ENST00000606068 577 ntBASIC11.27□□□□□ -0.61
SH2D1AO60880 AC074044.1-201ENST00000609673 707 ntBASIC11.27□□□□□ -0.61
SH2D1AO60880 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC11.27□□□□□ -0.61
SH2D1AO60880 C20orf181-201ENST00000623918 480 ntBASIC11.27□□□□□ -0.61
SH2D1AO60880 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC11.27□□□□□ -0.61
SH2D1AO60880 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SH2D1AO60880 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SH2D1AO60880 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
SH2D1AO60880 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SH2D1AO60880 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC11.27□□□□□ -0.61
SH2D1AO60880 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC11.27□□□□□ -0.61
SH2D1AO60880 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC11.27□□□□□ -0.61
SH2D1AO60880 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC11.27□□□□□ -0.61
SH2D1AO60880 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
SH2D1AO60880 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC11.27□□□□□ -0.61
SH2D1AO60880 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SH2D1AO60880 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SH2D1AO60880 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC11.27□□□□□ -0.61
SH2D1AO60880 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SH2D1AO60880 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SH2D1AO60880 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
SH2D1AO60880 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC11.27□□□□□ -0.61
SH2D1AO60880 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SH2D1AO60880 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SH2D1AO60880 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC11.27□□□□□ -0.61
SH2D1AO60880 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SH2D1AO60880 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
SH2D1AO60880 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC11.27□□□□□ -0.61
SH2D1AO60880 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
SH2D1AO60880 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SH2D1AO60880 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC11.27□□□□□ -0.61
SH2D1AO60880 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SH2D1AO60880 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SH2D1AO60880 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SH2D1AO60880 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SH2D1AO60880 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC11.26□□□□□ -0.61
SH2D1AO60880 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
SH2D1AO60880 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SH2D1AO60880 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SH2D1AO60880 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SH2D1AO60880 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SH2D1AO60880 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms