Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM88BA6NKF7 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM88BA6NKF7 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMEM88BA6NKF7 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC17.02■□□□□ 0.31
TMEM88BA6NKF7 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMEM88BA6NKF7 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC17.02■□□□□ 0.31
TMEM88BA6NKF7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.02■□□□□ 0.31
TMEM88BA6NKF7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.02■□□□□ 0.31
TMEM88BA6NKF7 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMEM88BA6NKF7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
TMEM88BA6NKF7 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
TMEM88BA6NKF7 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
TMEM88BA6NKF7 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 AC112504.1-201ENST00000623415 1841 ntBASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 FAM197Y6-201ENST00000420524 766 ntBASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 KRT18P4-201ENST00000422599 1288 ntBASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 PFN2-212ENST00000490975 858 ntTSL 4 BASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 AC124068.2-201ENST00000569473 1109 ntBASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 AC010503.4-201ENST00000615487 688 ntBASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 AC013726.1-201ENST00000563747 2285 ntBASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 FKBP4P8-201ENST00000610931 1369 ntBASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
TMEM88BA6NKF7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TMEM88BA6NKF7 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM88BA6NKF7 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM88BA6NKF7 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM88BA6NKF7 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC17■□□□□ 0.31
TMEM88BA6NKF7 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM88BA6NKF7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM88BA6NKF7 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM88BA6NKF7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17■□□□□ 0.31
TMEM88BA6NKF7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TMEM88BA6NKF7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM88BA6NKF7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM88BA6NKF7 CICP11-201ENST00000434745 2827 ntBASIC17■□□□□ 0.31
TMEM88BA6NKF7 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM88BA6NKF7 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM88BA6NKF7 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC17■□□□□ 0.31
TMEM88BA6NKF7 JPT2-203ENST00000382711 894 ntTSL 4 BASIC17■□□□□ 0.31
TMEM88BA6NKF7 MAGEA7P-201ENST00000436482 942 ntBASIC17■□□□□ 0.31
TMEM88BA6NKF7 SOD2-205ENST00000444946 917 ntTSL 2 BASIC17■□□□□ 0.31
TMEM88BA6NKF7 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM88BA6NKF7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM88BA6NKF7 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM88BA6NKF7 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC17■□□□□ 0.31
TMEM88BA6NKF7 IGHV1-12-201ENST00000518307 205 ntBASIC17■□□□□ 0.31
TMEM88BA6NKF7 AP002353.1-201ENST00000528257 1599 ntBASIC17■□□□□ 0.31
TMEM88BA6NKF7 F11R-204ENST00000537746 1245 ntTSL 2 BASIC17■□□□□ 0.31
TMEM88BA6NKF7 AC142086.5-202ENST00000562500 217 ntBASIC17■□□□□ 0.31
TMEM88BA6NKF7 COX5A-205ENST00000568517 582 ntTSL 3 BASIC17■□□□□ 0.31
TMEM88BA6NKF7 MIR4254-201ENST00000581063 76 ntBASIC17■□□□□ 0.31
TMEM88BA6NKF7 GAS7-216ENST00000583882 553 ntTSL 5 BASIC17■□□□□ 0.31
TMEM88BA6NKF7 AC254633.1-201ENST00000606790 345 ntBASIC17■□□□□ 0.31
TMEM88BA6NKF7 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC17■□□□□ 0.31
TMEM88BA6NKF7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TMEM88BA6NKF7 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17■□□□□ 0.31
TMEM88BA6NKF7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM88BA6NKF7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM88BA6NKF7 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17■□□□□ 0.31
TMEM88BA6NKF7 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM88BA6NKF7 R3HDM2P2-201ENST00000401880 2116 ntBASIC17■□□□□ 0.31
TMEM88BA6NKF7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17■□□□□ 0.31
TMEM88BA6NKF7 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC17■□□□□ 0.31
TMEM88BA6NKF7 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM88BA6NKF7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms