Protein–RNA interactions for Protein: Q9Y6M7

SLC4A7, Sodium bicarbonate cotransporter 3, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A7Q9Y6M7 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC4A7Q9Y6M7 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC4A7Q9Y6M7 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.4■□□□□ 0.22
SLC4A7Q9Y6M7 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC4A7Q9Y6M7 AC242376.1-201ENST00000559033 726 ntBASIC16.4■□□□□ 0.22
SLC4A7Q9Y6M7 MIR4683-201ENST00000579659 81 ntBASIC16.4■□□□□ 0.22
SLC4A7Q9Y6M7 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC4A7Q9Y6M7 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.4■□□□□ 0.22
SLC4A7Q9Y6M7 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.4■□□□□ 0.22
SLC4A7Q9Y6M7 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC4A7Q9Y6M7 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.4■□□□□ 0.22
SLC4A7Q9Y6M7 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC4A7Q9Y6M7 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SLC4A7Q9Y6M7 AL805961.1-201ENST00000642026 753 ntBASIC16.4■□□□□ 0.22
SLC4A7Q9Y6M7 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC4A7Q9Y6M7 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SLC4A7Q9Y6M7 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SLC4A7Q9Y6M7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC4A7Q9Y6M7 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC4A7Q9Y6M7 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC4A7Q9Y6M7 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SLC4A7Q9Y6M7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC4A7Q9Y6M7 FKBP4P6-201ENST00000457486 1332 ntBASIC16.4■□□□□ 0.22
SLC4A7Q9Y6M7 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SLC4A7Q9Y6M7 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.4■□□□□ 0.22
SLC4A7Q9Y6M7 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC4A7Q9Y6M7 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC4A7Q9Y6M7 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC4A7Q9Y6M7 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC4A7Q9Y6M7 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SLC4A7Q9Y6M7 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.22
SLC4A7Q9Y6M7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
SLC4A7Q9Y6M7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SLC4A7Q9Y6M7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SLC4A7Q9Y6M7 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 CFL1-206ENST00000527344 962 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC4A7Q9Y6M7 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC4A7Q9Y6M7 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC4A7Q9Y6M7 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC4A7Q9Y6M7 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC4A7Q9Y6M7 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC4A7Q9Y6M7 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SLC4A7Q9Y6M7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SLC4A7Q9Y6M7 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC4A7Q9Y6M7 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC4A7Q9Y6M7 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC4A7Q9Y6M7 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC4A7Q9Y6M7 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC4A7Q9Y6M7 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
SLC4A7Q9Y6M7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC4A7Q9Y6M7 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC4A7Q9Y6M7 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC4A7Q9Y6M7 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC4A7Q9Y6M7 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SLC4A7Q9Y6M7 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC4A7Q9Y6M7 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC4A7Q9Y6M7 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC4A7Q9Y6M7 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.38■□□□□ 0.21
SLC4A7Q9Y6M7 RPSAP31-201ENST00000416648 895 ntBASIC16.38■□□□□ 0.21
SLC4A7Q9Y6M7 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC4A7Q9Y6M7 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.38■□□□□ 0.21
SLC4A7Q9Y6M7 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms