Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTCH2Q9Y6C5 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTCH2Q9Y6C5 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTCH2Q9Y6C5 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.68■□□□□ 0.26
PTCH2Q9Y6C5 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PTCH2Q9Y6C5 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
PTCH2Q9Y6C5 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTCH2Q9Y6C5 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
PTCH2Q9Y6C5 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PTCH2Q9Y6C5 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC16.68■□□□□ 0.26
PTCH2Q9Y6C5 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC16.68■□□□□ 0.26
PTCH2Q9Y6C5 GUSBP10-201ENST00000417412 665 ntBASIC16.68■□□□□ 0.26
PTCH2Q9Y6C5 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC16.68■□□□□ 0.26
PTCH2Q9Y6C5 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC16.68■□□□□ 0.26
PTCH2Q9Y6C5 DUX4L50-201ENST00000455245 715 ntBASIC16.68■□□□□ 0.26
PTCH2Q9Y6C5 AC244197.1-201ENST00000456494 951 ntBASIC16.68■□□□□ 0.26
PTCH2Q9Y6C5 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC16.68■□□□□ 0.26
PTCH2Q9Y6C5 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC16.68■□□□□ 0.26
PTCH2Q9Y6C5 ALG3P1-201ENST00000508806 1114 ntBASIC16.68■□□□□ 0.26
PTCH2Q9Y6C5 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC16.68■□□□□ 0.26
PTCH2Q9Y6C5 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.68■□□□□ 0.26
PTCH2Q9Y6C5 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTCH2Q9Y6C5 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTCH2Q9Y6C5 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTCH2Q9Y6C5 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
PTCH2Q9Y6C5 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTCH2Q9Y6C5 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
PTCH2Q9Y6C5 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTCH2Q9Y6C5 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTCH2Q9Y6C5 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTCH2Q9Y6C5 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.68■□□□□ 0.26
PTCH2Q9Y6C5 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.68■□□□□ 0.26
PTCH2Q9Y6C5 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PTCH2Q9Y6C5 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTCH2Q9Y6C5 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PTCH2Q9Y6C5 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTCH2Q9Y6C5 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PTCH2Q9Y6C5 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.67■□□□□ 0.26
PTCH2Q9Y6C5 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PTCH2Q9Y6C5 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC16.67■□□□□ 0.26
PTCH2Q9Y6C5 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PTCH2Q9Y6C5 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PTCH2Q9Y6C5 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTCH2Q9Y6C5 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC16.67■□□□□ 0.26
PTCH2Q9Y6C5 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC16.67■□□□□ 0.26
PTCH2Q9Y6C5 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC16.67■□□□□ 0.26
PTCH2Q9Y6C5 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.67■□□□□ 0.26
PTCH2Q9Y6C5 AC138701.2-201ENST00000553634 226 ntBASIC16.67■□□□□ 0.26
PTCH2Q9Y6C5 HERC2P11-201ENST00000562845 725 ntBASIC16.67■□□□□ 0.26
PTCH2Q9Y6C5 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTCH2Q9Y6C5 AC100756.2-201ENST00000569537 736 ntBASIC16.67■□□□□ 0.26
PTCH2Q9Y6C5 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTCH2Q9Y6C5 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.67■□□□□ 0.26
PTCH2Q9Y6C5 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.67■□□□□ 0.26
PTCH2Q9Y6C5 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTCH2Q9Y6C5 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC16.67■□□□□ 0.26
PTCH2Q9Y6C5 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PTCH2Q9Y6C5 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PTCH2Q9Y6C5 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTCH2Q9Y6C5 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTCH2Q9Y6C5 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTCH2Q9Y6C5 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTCH2Q9Y6C5 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTCH2Q9Y6C5 AC003102.2-201ENST00000589195 1469 ntBASIC16.67■□□□□ 0.26
PTCH2Q9Y6C5 AL359258.3-201ENST00000622910 2331 ntBASIC16.67■□□□□ 0.26
PTCH2Q9Y6C5 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC16.67■□□□□ 0.26
PTCH2Q9Y6C5 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTCH2Q9Y6C5 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTCH2Q9Y6C5 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.66■□□□□ 0.26
PTCH2Q9Y6C5 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTCH2Q9Y6C5 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTCH2Q9Y6C5 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTCH2Q9Y6C5 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTCH2Q9Y6C5 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTCH2Q9Y6C5 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PTCH2Q9Y6C5 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTCH2Q9Y6C5 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PTCH2Q9Y6C5 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTCH2Q9Y6C5 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC16.66■□□□□ 0.26
PTCH2Q9Y6C5 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC16.66■□□□□ 0.26
PTCH2Q9Y6C5 RN7SKP109-201ENST00000410592 316 ntBASIC16.66■□□□□ 0.26
PTCH2Q9Y6C5 AL035414.1-201ENST00000451327 857 ntBASIC16.66■□□□□ 0.26
PTCH2Q9Y6C5 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
PTCH2Q9Y6C5 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC16.66■□□□□ 0.26
PTCH2Q9Y6C5 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC16.66■□□□□ 0.26
PTCH2Q9Y6C5 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.66■□□□□ 0.26
PTCH2Q9Y6C5 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms