Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 AC020910.5-201ENST00000623668 1865 ntBASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 RNA5SP359-201ENST00000364838 113 ntBASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 GUSBP10-201ENST00000417412 665 ntBASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 AL512306.1-201ENST00000432698 848 ntBASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 SERBP1P2-201ENST00000436888 1164 ntBASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZC3H4Q9UPT8 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
ZC3H4Q9UPT8 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZC3H4Q9UPT8 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.93■□□□□ 0.46
ZC3H4Q9UPT8 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZC3H4Q9UPT8 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.93■□□□□ 0.46
ZC3H4Q9UPT8 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ZC3H4Q9UPT8 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ZC3H4Q9UPT8 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.93■□□□□ 0.46
ZC3H4Q9UPT8 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZC3H4Q9UPT8 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZC3H4Q9UPT8 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.93■□□□□ 0.46
ZC3H4Q9UPT8 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.93■□□□□ 0.46
ZC3H4Q9UPT8 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZC3H4Q9UPT8 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.93■□□□□ 0.46
ZC3H4Q9UPT8 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
ZC3H4Q9UPT8 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.93■□□□□ 0.46
ZC3H4Q9UPT8 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZC3H4Q9UPT8 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZC3H4Q9UPT8 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
ZC3H4Q9UPT8 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZC3H4Q9UPT8 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZC3H4Q9UPT8 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC17.93■□□□□ 0.46
ZC3H4Q9UPT8 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC17.93■□□□□ 0.46
ZC3H4Q9UPT8 AC138701.2-201ENST00000553634 226 ntBASIC17.93■□□□□ 0.46
ZC3H4Q9UPT8 AC027139.1-201ENST00000565286 951 ntBASIC17.93■□□□□ 0.46
ZC3H4Q9UPT8 AP005212.2-201ENST00000584979 510 ntBASIC17.93■□□□□ 0.46
ZC3H4Q9UPT8 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC17.93■□□□□ 0.46
ZC3H4Q9UPT8 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC17.93■□□□□ 0.46
ZC3H4Q9UPT8 AC027601.3-201ENST00000622907 509 ntBASIC17.93■□□□□ 0.46
ZC3H4Q9UPT8 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC17.93■□□□□ 0.46
ZC3H4Q9UPT8 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC17.93■□□□□ 0.46
ZC3H4Q9UPT8 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC17.93■□□□□ 0.46
ZC3H4Q9UPT8 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.93■□□□□ 0.46
ZC3H4Q9UPT8 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZC3H4Q9UPT8 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.93■□□□□ 0.46
ZC3H4Q9UPT8 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ZC3H4Q9UPT8 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.92■□□□□ 0.46
ZC3H4Q9UPT8 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ZC3H4Q9UPT8 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZC3H4Q9UPT8 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ZC3H4Q9UPT8 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZC3H4Q9UPT8 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.92■□□□□ 0.46
ZC3H4Q9UPT8 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
ZC3H4Q9UPT8 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.92■□□□□ 0.46
ZC3H4Q9UPT8 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC17.92■□□□□ 0.46
ZC3H4Q9UPT8 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZC3H4Q9UPT8 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ZC3H4Q9UPT8 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.92■□□□□ 0.46
ZC3H4Q9UPT8 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.92■□□□□ 0.46
ZC3H4Q9UPT8 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZC3H4Q9UPT8 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
ZC3H4Q9UPT8 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
ZC3H4Q9UPT8 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
ZC3H4Q9UPT8 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.92■□□□□ 0.46
ZC3H4Q9UPT8 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZC3H4Q9UPT8 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
ZC3H4Q9UPT8 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
ZC3H4Q9UPT8 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms