Protein–RNA interactions for Protein: Q9UN81

L1RE1, LINE-1 retrotransposable element ORF1 protein, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
L1RE1Q9UN81 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
L1RE1Q9UN81 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
L1RE1Q9UN81 ACKR1-201ENST00000368121 1240 ntBASIC16.46■□□□□ 0.23
L1RE1Q9UN81 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
L1RE1Q9UN81 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
L1RE1Q9UN81 BAATP1-201ENST00000412284 1225 ntBASIC16.46■□□□□ 0.23
L1RE1Q9UN81 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.46■□□□□ 0.23
L1RE1Q9UN81 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.46■□□□□ 0.23
L1RE1Q9UN81 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.46■□□□□ 0.23
L1RE1Q9UN81 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.46■□□□□ 0.23
L1RE1Q9UN81 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.46■□□□□ 0.23
L1RE1Q9UN81 RAB43P1-201ENST00000561790 589 ntBASIC16.46■□□□□ 0.23
L1RE1Q9UN81 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.46■□□□□ 0.23
L1RE1Q9UN81 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.46■□□□□ 0.23
L1RE1Q9UN81 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.46■□□□□ 0.23
L1RE1Q9UN81 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.46■□□□□ 0.23
L1RE1Q9UN81 AL512343.1-201ENST00000605837 169 ntBASIC16.46■□□□□ 0.23
L1RE1Q9UN81 BX539320.1-201ENST00000623759 877 ntBASIC16.46■□□□□ 0.23
L1RE1Q9UN81 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.46■□□□□ 0.23
L1RE1Q9UN81 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
L1RE1Q9UN81 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.46■□□□□ 0.23
L1RE1Q9UN81 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
L1RE1Q9UN81 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.46■□□□□ 0.23
L1RE1Q9UN81 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
L1RE1Q9UN81 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC16.46■□□□□ 0.23
L1RE1Q9UN81 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
L1RE1Q9UN81 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.46■□□□□ 0.23
L1RE1Q9UN81 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
L1RE1Q9UN81 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
L1RE1Q9UN81 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.22
L1RE1Q9UN81 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
L1RE1Q9UN81 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.46■□□□□ 0.22
L1RE1Q9UN81 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
L1RE1Q9UN81 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
L1RE1Q9UN81 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 AC134312.5-201ENST00000568031 1313 ntBASIC16.45■□□□□ 0.22
L1RE1Q9UN81 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 CICP11-201ENST00000434745 2827 ntBASIC16.45■□□□□ 0.22
L1RE1Q9UN81 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 BCRP2-202ENST00000447763 634 ntBASIC16.45■□□□□ 0.22
L1RE1Q9UN81 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 AC106760.1-201ENST00000508690 800 ntBASIC16.45■□□□□ 0.22
L1RE1Q9UN81 BCRP6-201ENST00000510112 632 ntBASIC16.45■□□□□ 0.22
L1RE1Q9UN81 BCRP7-201ENST00000511549 544 ntBASIC16.45■□□□□ 0.22
L1RE1Q9UN81 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 AL645728.2-202ENST00000641679 227 ntBASIC16.45■□□□□ 0.22
L1RE1Q9UN81 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 AC007787.1-201ENST00000588095 1583 ntBASIC16.45■□□□□ 0.22
L1RE1Q9UN81 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 AC092135.3-201ENST00000624151 1846 ntBASIC16.45■□□□□ 0.22
L1RE1Q9UN81 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.45■□□□□ 0.22
L1RE1Q9UN81 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
L1RE1Q9UN81 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
L1RE1Q9UN81 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
L1RE1Q9UN81 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
L1RE1Q9UN81 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
L1RE1Q9UN81 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
L1RE1Q9UN81 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC16.44■□□□□ 0.22
L1RE1Q9UN81 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
L1RE1Q9UN81 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
L1RE1Q9UN81 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
L1RE1Q9UN81 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
L1RE1Q9UN81 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
L1RE1Q9UN81 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms