Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 FAM58BP-201ENST00000439056 645 ntBASIC18.08■□□□□ 0.48
DENND2AQ9ULE3 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC18.08■□□□□ 0.48
DENND2AQ9ULE3 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC18.08■□□□□ 0.48
DENND2AQ9ULE3 REEP1-202ENST00000453231 940 ntTSL 2 BASIC18.08■□□□□ 0.48
DENND2AQ9ULE3 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
DENND2AQ9ULE3 AC131206.1-201ENST00000538078 1211 ntBASIC18.08■□□□□ 0.48
DENND2AQ9ULE3 VPS18-202ENST00000558474 873 ntTSL 3 BASIC18.08■□□□□ 0.48
DENND2AQ9ULE3 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
DENND2AQ9ULE3 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
DENND2AQ9ULE3 AC005324.6-201ENST00000587972 613 ntBASIC18.08■□□□□ 0.48
DENND2AQ9ULE3 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC18.08■□□□□ 0.48
DENND2AQ9ULE3 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
DENND2AQ9ULE3 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC18.08■□□□□ 0.48
DENND2AQ9ULE3 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DENND2AQ9ULE3 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
DENND2AQ9ULE3 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
DENND2AQ9ULE3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
DENND2AQ9ULE3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
DENND2AQ9ULE3 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DENND2AQ9ULE3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DENND2AQ9ULE3 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DENND2AQ9ULE3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
DENND2AQ9ULE3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
DENND2AQ9ULE3 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DENND2AQ9ULE3 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC18.08■□□□□ 0.48
DENND2AQ9ULE3 AGAP7P-201ENST00000582299 2062 ntBASIC18.08■□□□□ 0.48
DENND2AQ9ULE3 AGAP14-201ENST00000624701 2060 ntBASIC18.08■□□□□ 0.48
DENND2AQ9ULE3 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DENND2AQ9ULE3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DENND2AQ9ULE3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DENND2AQ9ULE3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
DENND2AQ9ULE3 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DENND2AQ9ULE3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
DENND2AQ9ULE3 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
DENND2AQ9ULE3 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 AC005077.2-201ENST00000449786 690 ntBASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 GCOM2-201ENST00000509133 1104 ntBASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 RN7SL163P-201ENST00000583100 276 ntBASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 AC132192.2-201ENST00000596206 1147 ntBASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 NDUFV2P1-201ENST00000596415 907 ntBASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 AC004923.1-202ENST00000642106 209 ntBASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 ZBED1P1-201ENST00000502364 1930 ntBASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 AC068587.6-202ENST00000641839 5619 ntBASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DENND2AQ9ULE3 PARN-202ENST00000420015 2360 ntTSL 2 BASIC18.06■□□□□ 0.48
DENND2AQ9ULE3 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
DENND2AQ9ULE3 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC18.06■□□□□ 0.48
DENND2AQ9ULE3 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
DENND2AQ9ULE3 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DENND2AQ9ULE3 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
DENND2AQ9ULE3 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
DENND2AQ9ULE3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
DENND2AQ9ULE3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DENND2AQ9ULE3 ACE3P-201ENST00000423435 1973 ntBASIC18.06■□□□□ 0.48
DENND2AQ9ULE3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC18.06■□□□□ 0.48
DENND2AQ9ULE3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
DENND2AQ9ULE3 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DENND2AQ9ULE3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
DENND2AQ9ULE3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DENND2AQ9ULE3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DENND2AQ9ULE3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DENND2AQ9ULE3 TNRC18P2-201ENST00000417666 2714 ntBASIC18.06■□□□□ 0.48
DENND2AQ9ULE3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.06■□□□□ 0.48
DENND2AQ9ULE3 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
DENND2AQ9ULE3 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
DENND2AQ9ULE3 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DENND2AQ9ULE3 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DENND2AQ9ULE3 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
DENND2AQ9ULE3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DENND2AQ9ULE3 AC106794.1-201ENST00000506935 792 ntBASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms