Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCN11AQ9UI33 HIST2H2BA-201ENST00000412169 381 ntBASIC18.77■□□□□ 0.6
SCN11AQ9UI33 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SCN11AQ9UI33 DUX4L50-201ENST00000455245 715 ntBASIC18.77■□□□□ 0.6
SCN11AQ9UI33 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SCN11AQ9UI33 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC18.77■□□□□ 0.6
SCN11AQ9UI33 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SCN11AQ9UI33 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC18.77■□□□□ 0.6
SCN11AQ9UI33 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCN11AQ9UI33 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC18.77■□□□□ 0.6
SCN11AQ9UI33 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
SCN11AQ9UI33 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
SCN11AQ9UI33 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC18.77■□□□□ 0.59
SCN11AQ9UI33 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.77■□□□□ 0.59
SCN11AQ9UI33 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.77■□□□□ 0.59
SCN11AQ9UI33 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC18.77■□□□□ 0.59
SCN11AQ9UI33 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
SCN11AQ9UI33 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 AC023157.3-201ENST00000619086 2088 ntBASIC18.76■□□□□ 0.59
SCN11AQ9UI33 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 AC138701.2-201ENST00000553634 226 ntBASIC18.76■□□□□ 0.59
SCN11AQ9UI33 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 AC103810.10-201ENST00000606504 343 ntBASIC18.76■□□□□ 0.59
SCN11AQ9UI33 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC18.76■□□□□ 0.59
SCN11AQ9UI33 AC087392.5-201ENST00000612517 489 ntBASIC18.76■□□□□ 0.59
SCN11AQ9UI33 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC18.75■□□□□ 0.59
SCN11AQ9UI33 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCN11AQ9UI33 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCN11AQ9UI33 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCN11AQ9UI33 AC064801.2-201ENST00000625052 1303 ntBASIC18.75■□□□□ 0.59
SCN11AQ9UI33 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SCN11AQ9UI33 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SCN11AQ9UI33 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCN11AQ9UI33 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.75■□□□□ 0.59
SCN11AQ9UI33 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.75■□□□□ 0.59
SCN11AQ9UI33 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCN11AQ9UI33 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.75■□□□□ 0.59
SCN11AQ9UI33 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCN11AQ9UI33 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SCN11AQ9UI33 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
SCN11AQ9UI33 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCN11AQ9UI33 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCN11AQ9UI33 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SCN11AQ9UI33 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
SCN11AQ9UI33 RPL7P35-201ENST00000446943 740 ntBASIC18.75■□□□□ 0.59
SCN11AQ9UI33 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC18.75■□□□□ 0.59
SCN11AQ9UI33 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC18.75■□□□□ 0.59
SCN11AQ9UI33 NAA40-205ENST00000539656 577 ntTSL 4 BASIC18.75■□□□□ 0.59
SCN11AQ9UI33 NUDT4P2-201ENST00000578341 546 ntBASIC18.75■□□□□ 0.59
SCN11AQ9UI33 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC18.75■□□□□ 0.59
SCN11AQ9UI33 TCAF2P1-201ENST00000291129 2421 ntBASIC18.75■□□□□ 0.59
SCN11AQ9UI33 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SCN11AQ9UI33 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCN11AQ9UI33 AC025271.4-201ENST00000621477 1726 ntBASIC18.75■□□□□ 0.59
SCN11AQ9UI33 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC18.75■□□□□ 0.59
SCN11AQ9UI33 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.75■□□□□ 0.59
SCN11AQ9UI33 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SCN11AQ9UI33 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SCN11AQ9UI33 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCN11AQ9UI33 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCN11AQ9UI33 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SCN11AQ9UI33 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCN11AQ9UI33 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCN11AQ9UI33 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms