Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 AC018442.1-201ENST00000421439 2061 ntBASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 FAM90A12P-201ENST00000519497 2375 ntBASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 FAM90A24P-201ENST00000520792 2369 ntBASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 TPT1P11-201ENST00000458482 498 ntBASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 AC108073.2-201ENST00000464002 357 ntBASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 AC004790.2-201ENST00000623588 572 ntBASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBQLN2Q9UHD9 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
UBQLN2Q9UHD9 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UBQLN2Q9UHD9 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UBQLN2Q9UHD9 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
UBQLN2Q9UHD9 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBQLN2Q9UHD9 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBQLN2Q9UHD9 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UBQLN2Q9UHD9 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBQLN2Q9UHD9 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC12.78□□□□□ -0.36
UBQLN2Q9UHD9 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
UBQLN2Q9UHD9 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC12.78□□□□□ -0.36
UBQLN2Q9UHD9 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBQLN2Q9UHD9 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBQLN2Q9UHD9 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBQLN2Q9UHD9 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBQLN2Q9UHD9 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBQLN2Q9UHD9 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBQLN2Q9UHD9 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC12.78□□□□□ -0.36
UBQLN2Q9UHD9 AC009947.1-201ENST00000444350 727 ntBASIC12.78□□□□□ -0.36
UBQLN2Q9UHD9 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
UBQLN2Q9UHD9 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC12.78□□□□□ -0.36
UBQLN2Q9UHD9 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC12.78□□□□□ -0.36
UBQLN2Q9UHD9 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC12.78□□□□□ -0.36
UBQLN2Q9UHD9 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC12.78□□□□□ -0.36
UBQLN2Q9UHD9 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBQLN2Q9UHD9 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBQLN2Q9UHD9 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC12.78□□□□□ -0.36
UBQLN2Q9UHD9 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC12.78□□□□□ -0.36
UBQLN2Q9UHD9 AL805961.1-202ENST00000641562 540 ntBASIC12.78□□□□□ -0.36
UBQLN2Q9UHD9 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBQLN2Q9UHD9 AC023794.5-201ENST00000564380 2157 ntBASIC12.78□□□□□ -0.36
UBQLN2Q9UHD9 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBQLN2Q9UHD9 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBQLN2Q9UHD9 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UBQLN2Q9UHD9 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UBQLN2Q9UHD9 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBQLN2Q9UHD9 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UBQLN2Q9UHD9 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
UBQLN2Q9UHD9 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms