Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 AC025048.6-201ENST00000634326 1161 ntBASIC15.53■□□□□ 0.08
PCDH9Q9HC56 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH9Q9HC56 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 KRT8P22-201ENST00000562317 1415 ntBASIC15.52■□□□□ 0.08
PCDH9Q9HC56 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.52■□□□□ 0.08
PCDH9Q9HC56 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDH9Q9HC56 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
PCDH9Q9HC56 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
PCDH9Q9HC56 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDH9Q9HC56 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.07
PCDH9Q9HC56 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDH9Q9HC56 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDH9Q9HC56 AC092135.3-201ENST00000624151 1846 ntBASIC15.52■□□□□ 0.07
PCDH9Q9HC56 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.52■□□□□ 0.07
PCDH9Q9HC56 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PCDH9Q9HC56 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDH9Q9HC56 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
PCDH9Q9HC56 AL928921.2-201ENST00000641325 2442 ntBASIC15.52■□□□□ 0.07
PCDH9Q9HC56 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PCDH9Q9HC56 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDH9Q9HC56 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH9Q9HC56 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH9Q9HC56 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 264 ms