Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.71■□□□□ 0.27
ATP6V0A4Q9HBG4 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP6V0A4Q9HBG4 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.71■□□□□ 0.27
ATP6V0A4Q9HBG4 GOLGA2P4-201ENST00000441462 777 ntBASIC16.71■□□□□ 0.27
ATP6V0A4Q9HBG4 MESTP3-201ENST00000503460 968 ntBASIC16.71■□□□□ 0.27
ATP6V0A4Q9HBG4 FTLP10-202ENST00000505798 471 ntBASIC16.71■□□□□ 0.27
ATP6V0A4Q9HBG4 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.71■□□□□ 0.27
ATP6V0A4Q9HBG4 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.71■□□□□ 0.27
ATP6V0A4Q9HBG4 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.71■□□□□ 0.27
ATP6V0A4Q9HBG4 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.71■□□□□ 0.27
ATP6V0A4Q9HBG4 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.71■□□□□ 0.27
ATP6V0A4Q9HBG4 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.71■□□□□ 0.27
ATP6V0A4Q9HBG4 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP6V0A4Q9HBG4 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.71■□□□□ 0.27
ATP6V0A4Q9HBG4 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.71■□□□□ 0.27
ATP6V0A4Q9HBG4 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
ATP6V0A4Q9HBG4 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
ATP6V0A4Q9HBG4 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
ATP6V0A4Q9HBG4 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP6V0A4Q9HBG4 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
ATP6V0A4Q9HBG4 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.71■□□□□ 0.27
ATP6V0A4Q9HBG4 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.71■□□□□ 0.27
ATP6V0A4Q9HBG4 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.71■□□□□ 0.26
ATP6V0A4Q9HBG4 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
ATP6V0A4Q9HBG4 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 ACE3P-201ENST00000423435 1973 ntBASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 BTBD6P1-201ENST00000412176 1267 ntBASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 MIR4741-201ENST00000579822 90 ntBASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 OR10B1P-201ENST00000601666 907 ntBASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 AL022328.3-201ENST00000607943 679 ntBASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6V0A4Q9HBG4 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6V0A4Q9HBG4 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6V0A4Q9HBG4 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6V0A4Q9HBG4 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6V0A4Q9HBG4 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6V0A4Q9HBG4 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6V0A4Q9HBG4 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6V0A4Q9HBG4 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
ATP6V0A4Q9HBG4 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6V0A4Q9HBG4 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6V0A4Q9HBG4 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6V0A4Q9HBG4 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6V0A4Q9HBG4 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6V0A4Q9HBG4 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6V0A4Q9HBG4 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ATP6V0A4Q9HBG4 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
ATP6V0A4Q9HBG4 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6V0A4Q9HBG4 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ATP6V0A4Q9HBG4 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.69■□□□□ 0.26
ATP6V0A4Q9HBG4 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.69■□□□□ 0.26
ATP6V0A4Q9HBG4 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6V0A4Q9HBG4 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6V0A4Q9HBG4 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ATP6V0A4Q9HBG4 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6V0A4Q9HBG4 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6V0A4Q9HBG4 AC006033.1-201ENST00000440505 426 ntBASIC16.69■□□□□ 0.26
ATP6V0A4Q9HBG4 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.69■□□□□ 0.26
ATP6V0A4Q9HBG4 KRT8P13-201ENST00000463294 1010 ntBASIC16.69■□□□□ 0.26
ATP6V0A4Q9HBG4 AL391280.1-201ENST00000506969 1062 ntBASIC16.69■□□□□ 0.26
ATP6V0A4Q9HBG4 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6V0A4Q9HBG4 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
ATP6V0A4Q9HBG4 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
ATP6V0A4Q9HBG4 AC106820.3-201ENST00000561653 397 ntBASIC16.69■□□□□ 0.26
ATP6V0A4Q9HBG4 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms