Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.11■□□□□ 0.17
NXF3Q9H4D5 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 AC104073.2-201ENST00000453737 312 ntBASIC16.11■□□□□ 0.17
NXF3Q9H4D5 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 AC013355.1-201ENST00000562625 723 ntBASIC16.11■□□□□ 0.17
NXF3Q9H4D5 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 AC005324.6-201ENST00000587972 613 ntBASIC16.11■□□□□ 0.17
NXF3Q9H4D5 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 AC004923.1-202ENST00000642106 209 ntBASIC16.11■□□□□ 0.17
NXF3Q9H4D5 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NXF3Q9H4D5 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 AC106794.1-201ENST00000506935 792 ntBASIC16.1■□□□□ 0.17
NXF3Q9H4D5 AC022217.1-201ENST00000521069 738 ntBASIC16.1■□□□□ 0.17
NXF3Q9H4D5 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 AC008825.2-201ENST00000603374 718 ntBASIC16.1■□□□□ 0.17
NXF3Q9H4D5 BX088702.1-201ENST00000610784 235 ntBASIC16.1■□□□□ 0.17
NXF3Q9H4D5 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 AC068587.6-202ENST00000641839 5619 ntBASIC16.1■□□□□ 0.17
NXF3Q9H4D5 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 AC126177.1-201ENST00000547829 2218 ntBASIC16.1■□□□□ 0.17
NXF3Q9H4D5 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NXF3Q9H4D5 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms