Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
POLR2J3Q9H1A7 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
POLR2J3Q9H1A7 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
POLR2J3Q9H1A7 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
POLR2J3Q9H1A7 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
POLR2J3Q9H1A7 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
POLR2J3Q9H1A7 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
POLR2J3Q9H1A7 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
POLR2J3Q9H1A7 BEND3P1-201ENST00000421591 1944 ntBASIC13.96□□□□□ -0.18
POLR2J3Q9H1A7 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.96□□□□□ -0.18
POLR2J3Q9H1A7 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.96□□□□□ -0.18
POLR2J3Q9H1A7 AC018665.1-201ENST00000622927 1362 ntBASIC13.96□□□□□ -0.18
POLR2J3Q9H1A7 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 AC152010.1-201ENST00000415779 2006 ntBASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 AL353779.1-201ENST00000434793 351 ntBASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 RPL13AP25-201ENST00000484130 612 ntBASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 AC036164.1-201ENST00000570544 333 ntBASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
POLR2J3Q9H1A7 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 TREML5P-201ENST00000421694 576 ntBASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 AC026410.3-201ENST00000514280 936 ntBASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 AC010327.5-201ENST00000586923 3061 ntBASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms