Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 IGHV3-42-201ENST00000520410 361 ntBASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 ZNF890P-202ENST00000530367 1156 ntBASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 AC010336.2-201ENST00000564226 506 ntBASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 AL390754.1-201ENST00000619088 582 ntBASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 AL109936.8-201ENST00000641772 604 ntBASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 AC105233.6-201ENST00000642093 218 ntBASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 TCAF1P1-201ENST00000414990 2232 ntBASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 C8orf49-201ENST00000525043 1968 ntBASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 AC004890.2-204ENST00000481968 304 ntBASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 AC027612.1-201ENST00000445234 2395 ntBASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 AC087499.5-201ENST00000452760 1342 ntBASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AMBRA1Q9C0C7 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 INGX-202ENST00000489074 768 ntBASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 TERF1P3-201ENST00000505638 1227 ntBASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 AC000095.1-201ENST00000603208 874 ntBASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms