Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM2Q9C040 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM2Q9C040 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM2Q9C040 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TRIM2Q9C040 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM2Q9C040 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM2Q9C040 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM2Q9C040 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM2Q9C040 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM2Q9C040 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM2Q9C040 SLC7A15P-201ENST00000424028 1363 ntBASIC13.88□□□□□ -0.19
TRIM2Q9C040 AC018665.1-201ENST00000622927 1362 ntBASIC13.88□□□□□ -0.19
TRIM2Q9C040 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM2Q9C040 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM2Q9C040 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM2Q9C040 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM2Q9C040 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TRIM2Q9C040 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM2Q9C040 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM2Q9C040 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.88□□□□□ -0.19
TRIM2Q9C040 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM2Q9C040 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.88□□□□□ -0.19
TRIM2Q9C040 GNAQP1-201ENST00000444815 1067 ntBASIC13.88□□□□□ -0.19
TRIM2Q9C040 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.88□□□□□ -0.19
TRIM2Q9C040 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.88□□□□□ -0.19
TRIM2Q9C040 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.88□□□□□ -0.19
TRIM2Q9C040 API5-211ENST00000534695 560 ntTSL 5 BASIC13.88□□□□□ -0.19
TRIM2Q9C040 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.88□□□□□ -0.19
TRIM2Q9C040 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM2Q9C040 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.88□□□□□ -0.19
TRIM2Q9C040 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.88□□□□□ -0.19
TRIM2Q9C040 AC120045.2-201ENST00000567334 178 ntBASIC13.88□□□□□ -0.19
TRIM2Q9C040 TP53TG3HP-202ENST00000569755 579 ntBASIC13.88□□□□□ -0.19
TRIM2Q9C040 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.88□□□□□ -0.19
TRIM2Q9C040 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.88□□□□□ -0.19
TRIM2Q9C040 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TRIM2Q9C040 AC007431.3-201ENST00000623221 587 ntBASIC13.88□□□□□ -0.19
TRIM2Q9C040 PRSS30P-206ENST00000641773 873 ntBASIC13.88□□□□□ -0.19
TRIM2Q9C040 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM2Q9C040 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.88□□□□□ -0.19
TRIM2Q9C040 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM2Q9C040 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
TRIM2Q9C040 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRIM2Q9C040 AL137783.1-201ENST00000623494 1896 ntBASIC13.88□□□□□ -0.19
TRIM2Q9C040 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.88□□□□□ -0.19
TRIM2Q9C040 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM2Q9C040 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.88□□□□□ -0.19
TRIM2Q9C040 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM2Q9C040 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM2Q9C040 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
TRIM2Q9C040 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM2Q9C040 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM2Q9C040 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TRIM2Q9C040 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRIM2Q9C040 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM2Q9C040 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM2Q9C040 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.88□□□□□ -0.19
TRIM2Q9C040 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM2Q9C040 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM2Q9C040 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRIM2Q9C040 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM2Q9C040 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM2Q9C040 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM2Q9C040 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.87□□□□□ -0.19
TRIM2Q9C040 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TRIM2Q9C040 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM2Q9C040 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.87□□□□□ -0.19
TRIM2Q9C040 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM2Q9C040 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM2Q9C040 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM2Q9C040 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM2Q9C040 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM2Q9C040 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM2Q9C040 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TRIM2Q9C040 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM2Q9C040 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TRIM2Q9C040 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM2Q9C040 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
TRIM2Q9C040 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM2Q9C040 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.87□□□□□ -0.19
TRIM2Q9C040 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM2Q9C040 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM2Q9C040 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM2Q9C040 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
TRIM2Q9C040 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.87□□□□□ -0.19
TRIM2Q9C040 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
TRIM2Q9C040 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
TRIM2Q9C040 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.87□□□□□ -0.19
TRIM2Q9C040 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM2Q9C040 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
TRIM2Q9C040 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.87□□□□□ -0.19
TRIM2Q9C040 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM2Q9C040 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.87□□□□□ -0.19
TRIM2Q9C040 NME2P1-201ENST00000426182 414 ntBASIC13.87□□□□□ -0.19
TRIM2Q9C040 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM2Q9C040 DFFBP1-201ENST00000433250 979 ntBASIC13.87□□□□□ -0.19
TRIM2Q9C040 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.87□□□□□ -0.19
TRIM2Q9C040 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.87□□□□□ -0.19
TRIM2Q9C040 AC140912.1-201ENST00000577171 1054 ntBASIC13.87□□□□□ -0.19
TRIM2Q9C040 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms