Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAF4Q9BUZ4 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAF4Q9BUZ4 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TRAF4Q9BUZ4 AC015936.2-201ENST00000593177 259 ntBASIC13.53□□□□□ -0.24
TRAF4Q9BUZ4 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.53□□□□□ -0.24
TRAF4Q9BUZ4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.53□□□□□ -0.24
TRAF4Q9BUZ4 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAF4Q9BUZ4 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAF4Q9BUZ4 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
TRAF4Q9BUZ4 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAF4Q9BUZ4 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TRAF4Q9BUZ4 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAF4Q9BUZ4 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAF4Q9BUZ4 AP001282.1-201ENST00000531301 1499 ntBASIC13.53□□□□□ -0.24
TRAF4Q9BUZ4 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TRAF4Q9BUZ4 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAF4Q9BUZ4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAF4Q9BUZ4 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAF4Q9BUZ4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAF4Q9BUZ4 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
TRAF4Q9BUZ4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAF4Q9BUZ4 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAF4Q9BUZ4 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAF4Q9BUZ4 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAF4Q9BUZ4 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAF4Q9BUZ4 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.53□□□□□ -0.24
TRAF4Q9BUZ4 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAF4Q9BUZ4 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAF4Q9BUZ4 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAF4Q9BUZ4 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAF4Q9BUZ4 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAF4Q9BUZ4 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.52□□□□□ -0.24
TRAF4Q9BUZ4 AC152010.1-201ENST00000415779 2006 ntBASIC13.52□□□□□ -0.24
TRAF4Q9BUZ4 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TRAF4Q9BUZ4 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.52□□□□□ -0.24
TRAF4Q9BUZ4 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TRAF4Q9BUZ4 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
TRAF4Q9BUZ4 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAF4Q9BUZ4 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.52□□□□□ -0.24
TRAF4Q9BUZ4 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TRAF4Q9BUZ4 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAF4Q9BUZ4 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAF4Q9BUZ4 LINC01230-201ENST00000625222 3017 ntBASIC13.52□□□□□ -0.24
TRAF4Q9BUZ4 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 HLA-V-201ENST00000429037 534 ntBASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 AL442647.2-201ENST00000429864 857 ntBASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 AC234783.1-201ENST00000441761 496 ntBASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 AC022210.1-201ENST00000449856 793 ntBASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 AC008735.3-201ENST00000596646 500 ntBASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 AL512343.1-201ENST00000605837 169 ntBASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 AC015818.8-201ENST00000587907 1519 ntBASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 AC089987.1-201ENST00000551654 2209 ntBASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.52□□□□□ -0.25
TRAF4Q9BUZ4 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAF4Q9BUZ4 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAF4Q9BUZ4 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TRAF4Q9BUZ4 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.51□□□□□ -0.25
TRAF4Q9BUZ4 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAF4Q9BUZ4 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms