Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VGLL1Q99990 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VGLL1Q99990 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VGLL1Q99990 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
VGLL1Q99990 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC11.47□□□□□ -0.57
VGLL1Q99990 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC11.47□□□□□ -0.57
VGLL1Q99990 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC11.47□□□□□ -0.57
VGLL1Q99990 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
VGLL1Q99990 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC11.47□□□□□ -0.57
VGLL1Q99990 PPP6R2P1-201ENST00000450880 1275 ntBASIC11.47□□□□□ -0.57
VGLL1Q99990 AC112482.1-201ENST00000492080 688 ntBASIC11.47□□□□□ -0.57
VGLL1Q99990 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC11.47□□□□□ -0.57
VGLL1Q99990 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
VGLL1Q99990 AL512361.1-201ENST00000554200 418 ntBASIC11.47□□□□□ -0.57
VGLL1Q99990 SAMD11P1-201ENST00000571429 661 ntBASIC11.47□□□□□ -0.57
VGLL1Q99990 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC11.47□□□□□ -0.57
VGLL1Q99990 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VGLL1Q99990 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
VGLL1Q99990 AC074044.1-201ENST00000609673 707 ntBASIC11.47□□□□□ -0.57
VGLL1Q99990 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC11.47□□□□□ -0.57
VGLL1Q99990 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC11.47□□□□□ -0.57
VGLL1Q99990 GPER1-207ENST00000619052 571 ntTSL 2 BASIC11.47□□□□□ -0.57
VGLL1Q99990 GPR39-203ENST00000622084 900 ntTSL 5 BASIC11.47□□□□□ -0.57
VGLL1Q99990 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
VGLL1Q99990 AL109936.8-201ENST00000641772 604 ntBASIC11.47□□□□□ -0.57
VGLL1Q99990 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC11.47□□□□□ -0.57
VGLL1Q99990 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VGLL1Q99990 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
VGLL1Q99990 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
VGLL1Q99990 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
VGLL1Q99990 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VGLL1Q99990 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VGLL1Q99990 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VGLL1Q99990 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
VGLL1Q99990 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VGLL1Q99990 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC11.47□□□□□ -0.57
VGLL1Q99990 AL356585.2-201ENST00000625078 2396 ntBASIC11.47□□□□□ -0.57
VGLL1Q99990 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
VGLL1Q99990 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
VGLL1Q99990 PES1-204ENST00000402284 2144 ntTSL 5 BASIC11.47□□□□□ -0.57
VGLL1Q99990 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
VGLL1Q99990 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
VGLL1Q99990 BEND3P1-201ENST00000421591 1944 ntBASIC11.47□□□□□ -0.57
VGLL1Q99990 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC11.47□□□□□ -0.57
VGLL1Q99990 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
VGLL1Q99990 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
VGLL1Q99990 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
VGLL1Q99990 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
VGLL1Q99990 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VGLL1Q99990 CICP8-201ENST00000455800 2813 ntBASIC11.46□□□□□ -0.57
VGLL1Q99990 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
VGLL1Q99990 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
VGLL1Q99990 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VGLL1Q99990 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC11.46□□□□□ -0.57
VGLL1Q99990 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC11.46□□□□□ -0.57
VGLL1Q99990 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
VGLL1Q99990 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
VGLL1Q99990 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC11.46□□□□□ -0.57
VGLL1Q99990 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC11.46□□□□□ -0.57
VGLL1Q99990 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VGLL1Q99990 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC11.46□□□□□ -0.57
VGLL1Q99990 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
VGLL1Q99990 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC11.46□□□□□ -0.57
VGLL1Q99990 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC11.46□□□□□ -0.57
VGLL1Q99990 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
VGLL1Q99990 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VGLL1Q99990 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
VGLL1Q99990 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
VGLL1Q99990 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
VGLL1Q99990 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
VGLL1Q99990 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
VGLL1Q99990 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VGLL1Q99990 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
VGLL1Q99990 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
VGLL1Q99990 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC11.46□□□□□ -0.57
VGLL1Q99990 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VGLL1Q99990 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VGLL1Q99990 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC11.46□□□□□ -0.57
VGLL1Q99990 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
VGLL1Q99990 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC11.46□□□□□ -0.57
VGLL1Q99990 UPF3AP3-201ENST00000420996 769 ntBASIC11.46□□□□□ -0.57
VGLL1Q99990 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC11.46□□□□□ -0.57
VGLL1Q99990 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
VGLL1Q99990 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC11.46□□□□□ -0.57
VGLL1Q99990 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC11.46□□□□□ -0.57
VGLL1Q99990 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
VGLL1Q99990 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
VGLL1Q99990 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
VGLL1Q99990 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC11.46□□□□□ -0.57
VGLL1Q99990 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
VGLL1Q99990 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC11.46□□□□□ -0.57
VGLL1Q99990 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
VGLL1Q99990 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
VGLL1Q99990 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC11.46□□□□□ -0.58
VGLL1Q99990 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
VGLL1Q99990 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC11.46□□□□□ -0.58
VGLL1Q99990 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC11.46□□□□□ -0.58
VGLL1Q99990 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
VGLL1Q99990 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC11.46□□□□□ -0.58
VGLL1Q99990 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC11.46□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms