Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 HNRNPUP1-201ENST00000554987 333 ntBASIC14.05□□□□□ -0.16
TM9SF2Q99805 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.05□□□□□ -0.16
TM9SF2Q99805 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.05□□□□□ -0.16
TM9SF2Q99805 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.05□□□□□ -0.16
TM9SF2Q99805 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.05□□□□□ -0.16
TM9SF2Q99805 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TM9SF2Q99805 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM9SF2Q99805 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TM9SF2Q99805 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM9SF2Q99805 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM9SF2Q99805 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.05□□□□□ -0.16
TM9SF2Q99805 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM9SF2Q99805 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM9SF2Q99805 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TM9SF2Q99805 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM9SF2Q99805 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM9SF2Q99805 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.05□□□□□ -0.16
TM9SF2Q99805 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.05□□□□□ -0.16
TM9SF2Q99805 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.05□□□□□ -0.16
TM9SF2Q99805 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.05□□□□□ -0.16
TM9SF2Q99805 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.05□□□□□ -0.16
TM9SF2Q99805 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.05□□□□□ -0.16
TM9SF2Q99805 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM9SF2Q99805 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM9SF2Q99805 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM9SF2Q99805 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.05□□□□□ -0.16
TM9SF2Q99805 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TM9SF2Q99805 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM9SF2Q99805 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.05□□□□□ -0.16
TM9SF2Q99805 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
TM9SF2Q99805 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
TM9SF2Q99805 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TM9SF2Q99805 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.04□□□□□ -0.16
TM9SF2Q99805 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
TM9SF2Q99805 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.04□□□□□ -0.16
TM9SF2Q99805 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
TM9SF2Q99805 AL023775.1-201ENST00000454907 1746 ntBASIC14.04□□□□□ -0.16
TM9SF2Q99805 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TM9SF2Q99805 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TM9SF2Q99805 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TM9SF2Q99805 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TM9SF2Q99805 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.04□□□□□ -0.16
TM9SF2Q99805 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TM9SF2Q99805 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.04□□□□□ -0.16
TM9SF2Q99805 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
TM9SF2Q99805 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
TM9SF2Q99805 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TM9SF2Q99805 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TM9SF2Q99805 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
TM9SF2Q99805 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.04□□□□□ -0.16
TM9SF2Q99805 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TM9SF2Q99805 AC098850.1-201ENST00000419919 790 ntBASIC14.04□□□□□ -0.16
TM9SF2Q99805 AL442647.2-201ENST00000429864 857 ntBASIC14.04□□□□□ -0.16
TM9SF2Q99805 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.04□□□□□ -0.16
TM9SF2Q99805 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.04□□□□□ -0.16
TM9SF2Q99805 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.04□□□□□ -0.16
TM9SF2Q99805 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.04□□□□□ -0.16
TM9SF2Q99805 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.04□□□□□ -0.16
TM9SF2Q99805 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.04□□□□□ -0.16
TM9SF2Q99805 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.04□□□□□ -0.16
TM9SF2Q99805 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.04□□□□□ -0.16
TM9SF2Q99805 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.04□□□□□ -0.16
TM9SF2Q99805 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.04□□□□□ -0.16
TM9SF2Q99805 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.04□□□□□ -0.16
TM9SF2Q99805 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.04□□□□□ -0.16
TM9SF2Q99805 AL391069.4-201ENST00000609583 481 ntBASIC14.04□□□□□ -0.16
TM9SF2Q99805 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TM9SF2Q99805 IGHV3-72-202ENST00000621503 303 ntBASIC14.04□□□□□ -0.16
TM9SF2Q99805 AL033527.5-201ENST00000641382 801 ntBASIC14.04□□□□□ -0.16
TM9SF2Q99805 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.04□□□□□ -0.16
TM9SF2Q99805 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TM9SF2Q99805 AC138969.2-201ENST00000532739 9932 ntBASIC14.04□□□□□ -0.16
TM9SF2Q99805 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.04□□□□□ -0.16
TM9SF2Q99805 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.04□□□□□ -0.16
TM9SF2Q99805 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.04□□□□□ -0.16
TM9SF2Q99805 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TM9SF2Q99805 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TM9SF2Q99805 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TM9SF2Q99805 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TM9SF2Q99805 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TM9SF2Q99805 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
TM9SF2Q99805 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TM9SF2Q99805 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.04□□□□□ -0.16
TM9SF2Q99805 AC010327.5-201ENST00000586923 3061 ntBASIC14.04□□□□□ -0.16
TM9SF2Q99805 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TM9SF2Q99805 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TM9SF2Q99805 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TM9SF2Q99805 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TM9SF2Q99805 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TM9SF2Q99805 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TM9SF2Q99805 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TM9SF2Q99805 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TM9SF2Q99805 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.03□□□□□ -0.16
TM9SF2Q99805 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
TM9SF2Q99805 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TM9SF2Q99805 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TM9SF2Q99805 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
TM9SF2Q99805 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TM9SF2Q99805 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TM9SF2Q99805 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms