Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC6Q99741 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC6Q99741 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC6Q99741 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDC6Q99741 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC6Q99741 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
CDC6Q99741 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC6Q99741 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC6Q99741 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CDC6Q99741 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC6Q99741 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CDC6Q99741 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC6Q99741 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDC6Q99741 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC6Q99741 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC6Q99741 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDC6Q99741 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC6Q99741 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC6Q99741 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC6Q99741 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC6Q99741 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC6Q99741 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC6Q99741 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC6Q99741 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.46□□□□□ -0.09
CDC6Q99741 AC079112.1-201ENST00000454972 939 ntBASIC14.46□□□□□ -0.09
CDC6Q99741 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC14.46□□□□□ -0.09
CDC6Q99741 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.46□□□□□ -0.09
CDC6Q99741 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDC6Q99741 CFL1-206ENST00000527344 962 ntTSL 2 BASIC14.46□□□□□ -0.09
CDC6Q99741 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.46□□□□□ -0.09
CDC6Q99741 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.46□□□□□ -0.09
CDC6Q99741 DNM1P30-201ENST00000563586 452 ntBASIC14.46□□□□□ -0.09
CDC6Q99741 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.46□□□□□ -0.09
CDC6Q99741 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CDC6Q99741 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CDC6Q99741 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC6Q99741 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC6Q99741 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.46□□□□□ -0.09
CDC6Q99741 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.46□□□□□ -0.09
CDC6Q99741 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.46□□□□□ -0.09
CDC6Q99741 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC6Q99741 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDC6Q99741 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC6Q99741 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC6Q99741 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDC6Q99741 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CDC6Q99741 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDC6Q99741 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.46□□□□□ -0.09
CDC6Q99741 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDC6Q99741 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
CDC6Q99741 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDC6Q99741 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDC6Q99741 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
CDC6Q99741 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDC6Q99741 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDC6Q99741 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
CDC6Q99741 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDC6Q99741 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDC6Q99741 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CDC6Q99741 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDC6Q99741 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.46□□□□□ -0.1
CDC6Q99741 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.45□□□□□ -0.1
CDC6Q99741 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDC6Q99741 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.45□□□□□ -0.1
CDC6Q99741 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.45□□□□□ -0.1
CDC6Q99741 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
CDC6Q99741 LINC02447-202ENST00000501888 2146 ntBASIC14.45□□□□□ -0.1
CDC6Q99741 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.45□□□□□ -0.1
CDC6Q99741 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDC6Q99741 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDC6Q99741 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CDC6Q99741 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDC6Q99741 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.45□□□□□ -0.1
CDC6Q99741 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDC6Q99741 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDC6Q99741 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDC6Q99741 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDC6Q99741 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDC6Q99741 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.45□□□□□ -0.1
CDC6Q99741 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CDC6Q99741 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CDC6Q99741 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDC6Q99741 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDC6Q99741 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDC6Q99741 AC078875.1-201ENST00000431907 724 ntBASIC14.45□□□□□ -0.1
CDC6Q99741 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDC6Q99741 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.45□□□□□ -0.1
CDC6Q99741 AP002803.1-201ENST00000528836 498 ntBASIC14.45□□□□□ -0.1
CDC6Q99741 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CDC6Q99741 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC14.45□□□□□ -0.1
CDC6Q99741 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.45□□□□□ -0.1
CDC6Q99741 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.45□□□□□ -0.1
CDC6Q99741 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.45□□□□□ -0.1
CDC6Q99741 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CDC6Q99741 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CDC6Q99741 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CDC6Q99741 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
CDC6Q99741 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDC6Q99741 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CDC6Q99741 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms