Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 AC012508.2-201ENST00000567613 1472 ntBASIC16.04■□□□□ 0.16
YME1L1Q96TA2 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 FAM90A2P-201ENST00000511144 1395 ntBASIC16.04■□□□□ 0.16
YME1L1Q96TA2 FAM90A25P-201ENST00000528404 1395 ntBASIC16.04■□□□□ 0.16
YME1L1Q96TA2 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 AC074138.1-201ENST00000611182 1303 ntBASIC16.04■□□□□ 0.16
YME1L1Q96TA2 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 RPL8P2-201ENST00000430538 502 ntBASIC16.04■□□□□ 0.16
YME1L1Q96TA2 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 RN7SL258P-201ENST00000478664 300 ntBASIC16.04■□□□□ 0.16
YME1L1Q96TA2 RN7SL67P-201ENST00000492147 296 ntBASIC16.04■□□□□ 0.16
YME1L1Q96TA2 AC008723.1-201ENST00000506922 207 ntBASIC16.04■□□□□ 0.16
YME1L1Q96TA2 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 CFL1-206ENST00000527344 962 ntTSL 2 BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 Z98259.2-201ENST00000641583 609 ntBASIC16.04■□□□□ 0.16
YME1L1Q96TA2 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
YME1L1Q96TA2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
YME1L1Q96TA2 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
YME1L1Q96TA2 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
YME1L1Q96TA2 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.03■□□□□ 0.16
YME1L1Q96TA2 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.03■□□□□ 0.16
YME1L1Q96TA2 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
YME1L1Q96TA2 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
YME1L1Q96TA2 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
YME1L1Q96TA2 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
YME1L1Q96TA2 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
YME1L1Q96TA2 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.03■□□□□ 0.16
YME1L1Q96TA2 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
YME1L1Q96TA2 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
YME1L1Q96TA2 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
YME1L1Q96TA2 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
YME1L1Q96TA2 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
YME1L1Q96TA2 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
YME1L1Q96TA2 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC16.03■□□□□ 0.16
YME1L1Q96TA2 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC16.03■□□□□ 0.16
YME1L1Q96TA2 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
YME1L1Q96TA2 AP000356.3-201ENST00000382243 753 ntBASIC16.03■□□□□ 0.16
YME1L1Q96TA2 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
YME1L1Q96TA2 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.03■□□□□ 0.16
YME1L1Q96TA2 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
YME1L1Q96TA2 AC079112.1-201ENST00000454972 939 ntBASIC16.03■□□□□ 0.16
YME1L1Q96TA2 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.03■□□□□ 0.16
YME1L1Q96TA2 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.03■□□□□ 0.16
YME1L1Q96TA2 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.03■□□□□ 0.16
YME1L1Q96TA2 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
YME1L1Q96TA2 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
YME1L1Q96TA2 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
YME1L1Q96TA2 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
YME1L1Q96TA2 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
YME1L1Q96TA2 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
YME1L1Q96TA2 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
YME1L1Q96TA2 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
YME1L1Q96TA2 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
YME1L1Q96TA2 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.02■□□□□ 0.16
YME1L1Q96TA2 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
YME1L1Q96TA2 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms