Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CRAMP1Q96RY5 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CRAMP1Q96RY5 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
CRAMP1Q96RY5 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.05■□□□□ 0.48
CRAMP1Q96RY5 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
CRAMP1Q96RY5 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.05■□□□□ 0.48
CRAMP1Q96RY5 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CRAMP1Q96RY5 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CRAMP1Q96RY5 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CRAMP1Q96RY5 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CRAMP1Q96RY5 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CRAMP1Q96RY5 Z69890.1-201ENST00000382990 339 ntBASIC18.05■□□□□ 0.48
CRAMP1Q96RY5 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC18.05■□□□□ 0.48
CRAMP1Q96RY5 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CRAMP1Q96RY5 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC18.05■□□□□ 0.48
CRAMP1Q96RY5 KRT18P66-201ENST00000452970 1269 ntBASIC18.05■□□□□ 0.48
CRAMP1Q96RY5 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC18.05■□□□□ 0.48
CRAMP1Q96RY5 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CRAMP1Q96RY5 POLD4-208ENST00000532830 904 ntTSL 3 BASIC18.05■□□□□ 0.48
CRAMP1Q96RY5 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CRAMP1Q96RY5 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC18.05■□□□□ 0.48
CRAMP1Q96RY5 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC18.05■□□□□ 0.48
CRAMP1Q96RY5 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC18.05■□□□□ 0.48
CRAMP1Q96RY5 AL132780.4-201ENST00000624870 1135 ntBASIC18.05■□□□□ 0.48
CRAMP1Q96RY5 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CRAMP1Q96RY5 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.05■□□□□ 0.48
CRAMP1Q96RY5 TMBIM7P-203ENST00000641617 1718 ntBASIC18.05■□□□□ 0.48
CRAMP1Q96RY5 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.05■□□□□ 0.48
CRAMP1Q96RY5 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CRAMP1Q96RY5 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CRAMP1Q96RY5 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CRAMP1Q96RY5 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CRAMP1Q96RY5 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC18.05■□□□□ 0.48
CRAMP1Q96RY5 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CRAMP1Q96RY5 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 HIST2H2BA-201ENST00000412169 381 ntBASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 MIR6756-201ENST00000616240 63 ntBASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 AC005618.3-201ENST00000624928 458 ntBASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 AC046158.3-201ENST00000624947 2558 ntBASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 PCDHGB8P-201ENST00000502926 1973 ntBASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 AL136172.1-201ENST00000598590 1394 ntBASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CRAMP1Q96RY5 MARK2P16-201ENST00000605714 1723 ntBASIC18.03■□□□□ 0.48
CRAMP1Q96RY5 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CRAMP1Q96RY5 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CRAMP1Q96RY5 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.03■□□□□ 0.48
CRAMP1Q96RY5 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CRAMP1Q96RY5 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CRAMP1Q96RY5 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC18.03■□□□□ 0.48
CRAMP1Q96RY5 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CRAMP1Q96RY5 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC18.03■□□□□ 0.48
CRAMP1Q96RY5 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CRAMP1Q96RY5 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC18.03■□□□□ 0.48
CRAMP1Q96RY5 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CRAMP1Q96RY5 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms