Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 PCBP2-OT1-201ENST00000634357 590 ntBASIC17■□□□□ 0.31
SYNGAP1Q96PV0 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17■□□□□ 0.31
SYNGAP1Q96PV0 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17■□□□□ 0.31
SYNGAP1Q96PV0 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17■□□□□ 0.31
SYNGAP1Q96PV0 API5-202ENST00000420461 2009 ntTSL 2 BASIC17■□□□□ 0.31
SYNGAP1Q96PV0 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
SYNGAP1Q96PV0 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SYNGAP1Q96PV0 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17■□□□□ 0.31
SYNGAP1Q96PV0 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17■□□□□ 0.31
SYNGAP1Q96PV0 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17■□□□□ 0.31
SYNGAP1Q96PV0 TMBIM7P-203ENST00000641617 1718 ntBASIC17■□□□□ 0.31
SYNGAP1Q96PV0 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SYNGAP1Q96PV0 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17■□□□□ 0.31
SYNGAP1Q96PV0 PKD1P5-201ENST00000532415 10291 ntBASIC17■□□□□ 0.31
SYNGAP1Q96PV0 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17■□□□□ 0.31
SYNGAP1Q96PV0 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SYNGAP1Q96PV0 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYNGAP1Q96PV0 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SYNGAP1Q96PV0 LBH-202ENST00000401506 485 ntTSL 3 BASIC16.99■□□□□ 0.31
SYNGAP1Q96PV0 AC007274.2-201ENST00000421675 662 ntBASIC16.99■□□□□ 0.31
SYNGAP1Q96PV0 PUDPP3-201ENST00000445368 636 ntBASIC16.99■□□□□ 0.31
SYNGAP1Q96PV0 AC125604.1-201ENST00000496255 707 ntBASIC16.99■□□□□ 0.31
SYNGAP1Q96PV0 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.99■□□□□ 0.31
SYNGAP1Q96PV0 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.99■□□□□ 0.31
SYNGAP1Q96PV0 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.99■□□□□ 0.31
SYNGAP1Q96PV0 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
SYNGAP1Q96PV0 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.99■□□□□ 0.31
SYNGAP1Q96PV0 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYNGAP1Q96PV0 MIR3907-201ENST00000579424 151 ntBASIC16.99■□□□□ 0.31
SYNGAP1Q96PV0 MIR4706-201ENST00000582134 82 ntBASIC16.99■□□□□ 0.31
SYNGAP1Q96PV0 AC079336.7-201ENST00000623428 1078 ntBASIC16.99■□□□□ 0.31
SYNGAP1Q96PV0 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYNGAP1Q96PV0 AC023157.3-201ENST00000619086 2088 ntBASIC16.99■□□□□ 0.31
SYNGAP1Q96PV0 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYNGAP1Q96PV0 AC023824.1-201ENST00000562945 2975 ntBASIC16.99■□□□□ 0.31
SYNGAP1Q96PV0 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SYNGAP1Q96PV0 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SYNGAP1Q96PV0 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYNGAP1Q96PV0 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYNGAP1Q96PV0 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SYNGAP1Q96PV0 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.99■□□□□ 0.31
SYNGAP1Q96PV0 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SYNGAP1Q96PV0 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.99■□□□□ 0.31
SYNGAP1Q96PV0 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYNGAP1Q96PV0 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYNGAP1Q96PV0 AL137783.1-201ENST00000623494 1896 ntBASIC16.99■□□□□ 0.31
SYNGAP1Q96PV0 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.99■□□□□ 0.31
SYNGAP1Q96PV0 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.99■□□□□ 0.31
SYNGAP1Q96PV0 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYNGAP1Q96PV0 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.99■□□□□ 0.31
SYNGAP1Q96PV0 AC012508.2-201ENST00000567613 1472 ntBASIC16.99■□□□□ 0.31
SYNGAP1Q96PV0 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 AC091046.1-201ENST00000331871 207 ntBASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 AC090164.2-201ENST00000611487 516 ntBASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 AC009093.2-202ENST00000620513 2079 ntBASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 AC011840.2-201ENST00000563063 1520 ntBASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SYNGAP1Q96PV0 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.97■□□□□ 0.31
SYNGAP1Q96PV0 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNGAP1Q96PV0 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SYNGAP1Q96PV0 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNGAP1Q96PV0 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNGAP1Q96PV0 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.97■□□□□ 0.31
SYNGAP1Q96PV0 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms