Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 INE2-201ENST00000630399 1874 ntBASIC12.47□□□□□ -0.41
GAFA1Q96PS6 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 ANKRD19P-201ENST00000338192 862 ntBASIC12.47□□□□□ -0.41
GAFA1Q96PS6 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 MIR1909-201ENST00000411312 80 ntBASIC12.47□□□□□ -0.41
GAFA1Q96PS6 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 OR10B1P-201ENST00000601666 907 ntBASIC12.47□□□□□ -0.41
GAFA1Q96PS6 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 RN7SKP175-201ENST00000408472 289 ntBASIC12.46□□□□□ -0.41
GAFA1Q96PS6 MIR1202-201ENST00000408529 83 ntBASIC12.46□□□□□ -0.41
GAFA1Q96PS6 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 AC104989.1-201ENST00000519711 778 ntBASIC12.46□□□□□ -0.41
GAFA1Q96PS6 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 AP003171.2-201ENST00000528208 925 ntBASIC12.46□□□□□ -0.41
GAFA1Q96PS6 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 MIR600HG-201ENST00000449175 5984 ntBASIC12.46□□□□□ -0.41
GAFA1Q96PS6 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms