Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.27□□□□□ -0.13
COL21A1Q96P44 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.27□□□□□ -0.13
COL21A1Q96P44 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.27□□□□□ -0.13
COL21A1Q96P44 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.27□□□□□ -0.13
COL21A1Q96P44 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
COL21A1Q96P44 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.27□□□□□ -0.13
COL21A1Q96P44 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
COL21A1Q96P44 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.27□□□□□ -0.13
COL21A1Q96P44 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
COL21A1Q96P44 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.27□□□□□ -0.13
COL21A1Q96P44 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
COL21A1Q96P44 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
COL21A1Q96P44 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
COL21A1Q96P44 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
COL21A1Q96P44 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
COL21A1Q96P44 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
COL21A1Q96P44 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.27□□□□□ -0.13
COL21A1Q96P44 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
COL21A1Q96P44 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
COL21A1Q96P44 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
COL21A1Q96P44 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
COL21A1Q96P44 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
COL21A1Q96P44 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.27□□□□□ -0.13
COL21A1Q96P44 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.26□□□□□ -0.13
COL21A1Q96P44 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL21A1Q96P44 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.26□□□□□ -0.13
COL21A1Q96P44 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.26□□□□□ -0.13
COL21A1Q96P44 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL21A1Q96P44 MTHFR-210ENST00000641407 2387 ntBASIC14.26□□□□□ -0.13
COL21A1Q96P44 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COL21A1Q96P44 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.26□□□□□ -0.13
COL21A1Q96P44 AC018529.2-202ENST00000611482 3087 ntBASIC14.26□□□□□ -0.13
COL21A1Q96P44 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL21A1Q96P44 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL21A1Q96P44 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
COL21A1Q96P44 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
COL21A1Q96P44 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.26□□□□□ -0.13
COL21A1Q96P44 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL21A1Q96P44 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COL21A1Q96P44 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL21A1Q96P44 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
COL21A1Q96P44 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL21A1Q96P44 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL21A1Q96P44 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL21A1Q96P44 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COL21A1Q96P44 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL21A1Q96P44 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
COL21A1Q96P44 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
COL21A1Q96P44 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL21A1Q96P44 BX640514.1-201ENST00000583223 1918 ntBASIC14.26□□□□□ -0.13
COL21A1Q96P44 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL21A1Q96P44 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL21A1Q96P44 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COL21A1Q96P44 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
COL21A1Q96P44 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
COL21A1Q96P44 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.26□□□□□ -0.13
COL21A1Q96P44 AC134915.1-201ENST00000426461 574 ntBASIC14.26□□□□□ -0.13
COL21A1Q96P44 VDAC1P7-201ENST00000462417 847 ntBASIC14.26□□□□□ -0.13
COL21A1Q96P44 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.26□□□□□ -0.13
COL21A1Q96P44 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COL21A1Q96P44 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COL21A1Q96P44 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
COL21A1Q96P44 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.26□□□□□ -0.13
COL21A1Q96P44 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.26□□□□□ -0.13
COL21A1Q96P44 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL21A1Q96P44 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.26□□□□□ -0.13
COL21A1Q96P44 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COL21A1Q96P44 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
COL21A1Q96P44 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.26□□□□□ -0.13
COL21A1Q96P44 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COL21A1Q96P44 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL21A1Q96P44 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COL21A1Q96P44 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.26□□□□□ -0.13
COL21A1Q96P44 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL21A1Q96P44 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL21A1Q96P44 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
COL21A1Q96P44 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL21A1Q96P44 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL21A1Q96P44 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.25□□□□□ -0.13
COL21A1Q96P44 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
COL21A1Q96P44 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL21A1Q96P44 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.25□□□□□ -0.13
COL21A1Q96P44 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.25□□□□□ -0.13
COL21A1Q96P44 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COL21A1Q96P44 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL21A1Q96P44 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL21A1Q96P44 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.25□□□□□ -0.13
COL21A1Q96P44 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.25□□□□□ -0.13
COL21A1Q96P44 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL21A1Q96P44 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL21A1Q96P44 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.25□□□□□ -0.13
COL21A1Q96P44 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL21A1Q96P44 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
COL21A1Q96P44 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL21A1Q96P44 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
COL21A1Q96P44 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL21A1Q96P44 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.25□□□□□ -0.13
COL21A1Q96P44 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL21A1Q96P44 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.25□□□□□ -0.13
COL21A1Q96P44 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms