Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VMP1Q96GC9 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VMP1Q96GC9 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VMP1Q96GC9 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
VMP1Q96GC9 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
VMP1Q96GC9 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.49□□□□□ -0.09
VMP1Q96GC9 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VMP1Q96GC9 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.49□□□□□ -0.09
VMP1Q96GC9 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
VMP1Q96GC9 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VMP1Q96GC9 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VMP1Q96GC9 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC14.49□□□□□ -0.09
VMP1Q96GC9 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VMP1Q96GC9 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
VMP1Q96GC9 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
VMP1Q96GC9 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
VMP1Q96GC9 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.49□□□□□ -0.09
VMP1Q96GC9 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
VMP1Q96GC9 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.49□□□□□ -0.09
VMP1Q96GC9 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
VMP1Q96GC9 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VMP1Q96GC9 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VMP1Q96GC9 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VMP1Q96GC9 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
VMP1Q96GC9 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VMP1Q96GC9 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VMP1Q96GC9 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.49□□□□□ -0.09
VMP1Q96GC9 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.49□□□□□ -0.09
VMP1Q96GC9 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VMP1Q96GC9 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.49□□□□□ -0.09
VMP1Q96GC9 AC134915.1-201ENST00000426461 574 ntBASIC14.49□□□□□ -0.09
VMP1Q96GC9 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.49□□□□□ -0.09
VMP1Q96GC9 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.49□□□□□ -0.09
VMP1Q96GC9 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.49□□□□□ -0.09
VMP1Q96GC9 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
VMP1Q96GC9 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.49□□□□□ -0.09
VMP1Q96GC9 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.49□□□□□ -0.09
VMP1Q96GC9 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.49□□□□□ -0.09
VMP1Q96GC9 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.49□□□□□ -0.09
VMP1Q96GC9 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.49□□□□□ -0.09
VMP1Q96GC9 AC133539.2-201ENST00000604757 467 ntBASIC14.49□□□□□ -0.09
VMP1Q96GC9 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.49□□□□□ -0.09
VMP1Q96GC9 WFDC1-204ENST00000613603 549 ntBASIC14.49□□□□□ -0.09
VMP1Q96GC9 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.49□□□□□ -0.09
VMP1Q96GC9 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VMP1Q96GC9 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VMP1Q96GC9 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.49□□□□□ -0.09
VMP1Q96GC9 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
VMP1Q96GC9 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VMP1Q96GC9 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
VMP1Q96GC9 INTS4P2-202ENST00000614726 2019 ntBASIC14.49□□□□□ -0.09
VMP1Q96GC9 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
VMP1Q96GC9 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.49□□□□□ -0.09
VMP1Q96GC9 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
VMP1Q96GC9 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
VMP1Q96GC9 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
VMP1Q96GC9 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VMP1Q96GC9 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.49□□□□□ -0.09
VMP1Q96GC9 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VMP1Q96GC9 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VMP1Q96GC9 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
VMP1Q96GC9 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.49□□□□□ -0.09
VMP1Q96GC9 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VMP1Q96GC9 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VMP1Q96GC9 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
VMP1Q96GC9 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.48□□□□□ -0.09
VMP1Q96GC9 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VMP1Q96GC9 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
VMP1Q96GC9 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VMP1Q96GC9 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VMP1Q96GC9 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VMP1Q96GC9 AC127383.1-201ENST00000444697 1800 ntBASIC14.48□□□□□ -0.09
VMP1Q96GC9 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VMP1Q96GC9 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
VMP1Q96GC9 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
VMP1Q96GC9 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.48□□□□□ -0.09
VMP1Q96GC9 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.48□□□□□ -0.09
VMP1Q96GC9 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
VMP1Q96GC9 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
VMP1Q96GC9 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.48□□□□□ -0.09
VMP1Q96GC9 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VMP1Q96GC9 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.48□□□□□ -0.09
VMP1Q96GC9 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
VMP1Q96GC9 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VMP1Q96GC9 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VMP1Q96GC9 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.48□□□□□ -0.09
VMP1Q96GC9 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.48□□□□□ -0.09
VMP1Q96GC9 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.48□□□□□ -0.09
VMP1Q96GC9 VDAC1P7-201ENST00000462417 847 ntBASIC14.48□□□□□ -0.09
VMP1Q96GC9 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.48□□□□□ -0.09
VMP1Q96GC9 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.48□□□□□ -0.09
VMP1Q96GC9 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
VMP1Q96GC9 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.48□□□□□ -0.09
VMP1Q96GC9 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.48□□□□□ -0.09
VMP1Q96GC9 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.48□□□□□ -0.09
VMP1Q96GC9 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.48□□□□□ -0.09
VMP1Q96GC9 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.48□□□□□ -0.09
VMP1Q96GC9 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.48□□□□□ -0.09
VMP1Q96GC9 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.48□□□□□ -0.09
VMP1Q96GC9 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms