Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PGBD4Q96DM1 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PGBD4Q96DM1 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PGBD4Q96DM1 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PGBD4Q96DM1 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.25■□□□□ 0.19
PGBD4Q96DM1 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PGBD4Q96DM1 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PGBD4Q96DM1 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PGBD4Q96DM1 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PGBD4Q96DM1 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.25■□□□□ 0.19
PGBD4Q96DM1 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PGBD4Q96DM1 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PGBD4Q96DM1 AC011840.2-201ENST00000563063 1520 ntBASIC16.24■□□□□ 0.19
PGBD4Q96DM1 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
PGBD4Q96DM1 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.24■□□□□ 0.19
PGBD4Q96DM1 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
PGBD4Q96DM1 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PGBD4Q96DM1 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PGBD4Q96DM1 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.24■□□□□ 0.19
PGBD4Q96DM1 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PGBD4Q96DM1 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PGBD4Q96DM1 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PGBD4Q96DM1 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PGBD4Q96DM1 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PGBD4Q96DM1 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.24■□□□□ 0.19
PGBD4Q96DM1 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.24■□□□□ 0.19
PGBD4Q96DM1 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.24■□□□□ 0.19
PGBD4Q96DM1 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.24■□□□□ 0.19
PGBD4Q96DM1 NKAIN1P1-201ENST00000435754 582 ntBASIC16.24■□□□□ 0.19
PGBD4Q96DM1 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.24■□□□□ 0.19
PGBD4Q96DM1 IGHJ2P-201ENST00000454480 60 ntBASIC16.24■□□□□ 0.19
PGBD4Q96DM1 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.24■□□□□ 0.19
PGBD4Q96DM1 AC106794.1-201ENST00000506935 792 ntBASIC16.24■□□□□ 0.19
PGBD4Q96DM1 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.24■□□□□ 0.19
PGBD4Q96DM1 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.24■□□□□ 0.19
PGBD4Q96DM1 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PGBD4Q96DM1 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.24■□□□□ 0.19
PGBD4Q96DM1 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.24■□□□□ 0.19
PGBD4Q96DM1 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.24■□□□□ 0.19
PGBD4Q96DM1 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.24■□□□□ 0.19
PGBD4Q96DM1 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PGBD4Q96DM1 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PGBD4Q96DM1 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PGBD4Q96DM1 WASH3P-207ENST00000560956 1394 ntBASIC16.24■□□□□ 0.19
PGBD4Q96DM1 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PGBD4Q96DM1 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.24■□□□□ 0.19
PGBD4Q96DM1 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PGBD4Q96DM1 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PGBD4Q96DM1 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PGBD4Q96DM1 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PGBD4Q96DM1 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PGBD4Q96DM1 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PGBD4Q96DM1 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.23■□□□□ 0.19
PGBD4Q96DM1 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PGBD4Q96DM1 AL138725.1-201ENST00000407347 1314 ntBASIC16.23■□□□□ 0.19
PGBD4Q96DM1 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PGBD4Q96DM1 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PGBD4Q96DM1 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.23■□□□□ 0.19
PGBD4Q96DM1 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PGBD4Q96DM1 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PGBD4Q96DM1 SHC1P1-201ENST00000425230 1745 ntBASIC16.23■□□□□ 0.19
PGBD4Q96DM1 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PGBD4Q96DM1 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.23■□□□□ 0.19
PGBD4Q96DM1 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
PGBD4Q96DM1 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PGBD4Q96DM1 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PGBD4Q96DM1 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PGBD4Q96DM1 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PGBD4Q96DM1 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PGBD4Q96DM1 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PGBD4Q96DM1 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PGBD4Q96DM1 TLE1P1-201ENST00000422965 589 ntBASIC16.23■□□□□ 0.19
PGBD4Q96DM1 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PGBD4Q96DM1 HIST2H2BC-201ENST00000498492 580 ntBASIC16.23■□□□□ 0.19
PGBD4Q96DM1 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PGBD4Q96DM1 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PGBD4Q96DM1 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.23■□□□□ 0.19
PGBD4Q96DM1 AC100827.2-201ENST00000563214 1194 ntBASIC16.23■□□□□ 0.19
PGBD4Q96DM1 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PGBD4Q96DM1 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
PGBD4Q96DM1 AC008825.2-201ENST00000603374 718 ntBASIC16.23■□□□□ 0.19
PGBD4Q96DM1 AC084346.2-201ENST00000607097 949 ntBASIC16.23■□□□□ 0.19
PGBD4Q96DM1 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.23■□□□□ 0.19
PGBD4Q96DM1 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.23■□□□□ 0.19
PGBD4Q96DM1 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PGBD4Q96DM1 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PGBD4Q96DM1 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.23■□□□□ 0.19
PGBD4Q96DM1 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PGBD4Q96DM1 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PGBD4Q96DM1 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PGBD4Q96DM1 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PGBD4Q96DM1 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PGBD4Q96DM1 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PGBD4Q96DM1 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PGBD4Q96DM1 C18orf15-201ENST00000623680 2534 ntBASIC16.22■□□□□ 0.19
PGBD4Q96DM1 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PGBD4Q96DM1 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PGBD4Q96DM1 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PGBD4Q96DM1 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
PGBD4Q96DM1 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms