Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNED1Q8TER0 AC126365.1-201ENST00000578585 1514 ntBASIC17.88■□□□□ 0.45
SNED1Q8TER0 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNED1Q8TER0 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNED1Q8TER0 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNED1Q8TER0 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
SNED1Q8TER0 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNED1Q8TER0 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNED1Q8TER0 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SNED1Q8TER0 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SNED1Q8TER0 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC17.88■□□□□ 0.45
SNED1Q8TER0 PSMD4P1-201ENST00000433951 1109 ntBASIC17.88■□□□□ 0.45
SNED1Q8TER0 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC17.88■□□□□ 0.45
SNED1Q8TER0 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC17.88■□□□□ 0.45
SNED1Q8TER0 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC17.88■□□□□ 0.45
SNED1Q8TER0 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.88■□□□□ 0.45
SNED1Q8TER0 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SNED1Q8TER0 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNED1Q8TER0 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SNED1Q8TER0 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNED1Q8TER0 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SNED1Q8TER0 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNED1Q8TER0 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SNED1Q8TER0 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SNED1Q8TER0 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC17.87■□□□□ 0.45
SNED1Q8TER0 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC17.87■□□□□ 0.45
SNED1Q8TER0 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNED1Q8TER0 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SNED1Q8TER0 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNED1Q8TER0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SNED1Q8TER0 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNED1Q8TER0 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SNED1Q8TER0 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.87■□□□□ 0.45
SNED1Q8TER0 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNED1Q8TER0 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNED1Q8TER0 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SNED1Q8TER0 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC17.87■□□□□ 0.45
SNED1Q8TER0 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
SNED1Q8TER0 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.87■□□□□ 0.45
SNED1Q8TER0 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
SNED1Q8TER0 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SNED1Q8TER0 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SNED1Q8TER0 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SNED1Q8TER0 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNED1Q8TER0 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNED1Q8TER0 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNED1Q8TER0 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNED1Q8TER0 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC17.87■□□□□ 0.45
SNED1Q8TER0 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC17.87■□□□□ 0.45
SNED1Q8TER0 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC17.87■□□□□ 0.45
SNED1Q8TER0 ST13P19-201ENST00000442505 1124 ntBASIC17.87■□□□□ 0.45
SNED1Q8TER0 AC004837.1-201ENST00000446267 564 ntBASIC17.87■□□□□ 0.45
SNED1Q8TER0 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC17.87■□□□□ 0.45
SNED1Q8TER0 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNED1Q8TER0 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC17.87■□□□□ 0.45
SNED1Q8TER0 AC006158.1-201ENST00000610661 249 ntBASIC17.87■□□□□ 0.45
SNED1Q8TER0 LINC00431-202ENST00000636375 159 ntBASIC17.87■□□□□ 0.45
SNED1Q8TER0 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SNED1Q8TER0 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.87■□□□□ 0.45
SNED1Q8TER0 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.87■□□□□ 0.45
SNED1Q8TER0 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SNED1Q8TER0 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNED1Q8TER0 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SNED1Q8TER0 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNED1Q8TER0 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SNED1Q8TER0 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.86■□□□□ 0.45
SNED1Q8TER0 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNED1Q8TER0 AC132872.4-202ENST00000622924 2756 ntBASIC17.86■□□□□ 0.45
SNED1Q8TER0 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNED1Q8TER0 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SNED1Q8TER0 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.86■□□□□ 0.45
SNED1Q8TER0 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.86■□□□□ 0.45
SNED1Q8TER0 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SNED1Q8TER0 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SNED1Q8TER0 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
SNED1Q8TER0 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC17.86■□□□□ 0.45
SNED1Q8TER0 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC17.86■□□□□ 0.45
SNED1Q8TER0 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNED1Q8TER0 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNED1Q8TER0 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.86■□□□□ 0.45
SNED1Q8TER0 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SNED1Q8TER0 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SNED1Q8TER0 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNED1Q8TER0 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SNED1Q8TER0 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNED1Q8TER0 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SNED1Q8TER0 Z69890.1-201ENST00000382990 339 ntBASIC17.86■□□□□ 0.45
SNED1Q8TER0 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SNED1Q8TER0 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SNED1Q8TER0 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC17.86■□□□□ 0.45
SNED1Q8TER0 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC17.86■□□□□ 0.45
SNED1Q8TER0 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC17.86■□□□□ 0.45
SNED1Q8TER0 BCAS2P2-201ENST00000425064 674 ntBASIC17.86■□□□□ 0.45
SNED1Q8TER0 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SNED1Q8TER0 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC17.86■□□□□ 0.45
SNED1Q8TER0 AC092638.2-201ENST00000441105 947 ntBASIC17.86■□□□□ 0.45
SNED1Q8TER0 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SNED1Q8TER0 DUX4L50-201ENST00000455245 715 ntBASIC17.86■□□□□ 0.45
SNED1Q8TER0 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC17.86■□□□□ 0.45
SNED1Q8TER0 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms