Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 AC080013.5-201ENST00000607044 679 ntBASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 AHCYP3-201ENST00000420053 1279 ntBASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 MAGEA7P-201ENST00000436482 942 ntBASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 AC087203.1-201ENST00000532111 1181 ntBASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 MIR4254-201ENST00000581063 76 ntBASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 SUPT20HL2-201ENST00000486479 2409 ntBASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 CES3-203ENST00000543856 3178 ntTSL 2 BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 BAX-205ENST00000391871 687 ntTSL 5 BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 AC005740.1-201ENST00000515639 522 ntBASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 AL353622.2-201ENST00000605846 425 ntBASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 AC004466.2-201ENST00000614749 516 ntBASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 API5-203ENST00000455725 2257 ntTSL 2 BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
ALMS1Q8TCU4 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 BMF-206ENST00000558774 671 ntTSL 3 BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC9.74□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms