Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC19.28■□□□□ 0.68
COL22A1Q8NFW1 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC19.28■□□□□ 0.68
COL22A1Q8NFW1 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COL22A1Q8NFW1 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC19.28■□□□□ 0.68
COL22A1Q8NFW1 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
COL22A1Q8NFW1 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
COL22A1Q8NFW1 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL22A1Q8NFW1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL22A1Q8NFW1 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 KRT8P18-201ENST00000413425 1445 ntBASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 AC006987.1-201ENST00000413610 527 ntBASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 BX679664.3-201ENST00000414070 555 ntBASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 AC113935.1-201ENST00000471722 555 ntBASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 HNRNPA1P5-201ENST00000558213 966 ntBASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COL22A1Q8NFW1 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
COL22A1Q8NFW1 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.27■□□□□ 0.67
COL22A1Q8NFW1 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
COL22A1Q8NFW1 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
COL22A1Q8NFW1 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
COL22A1Q8NFW1 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL22A1Q8NFW1 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC19.26■□□□□ 0.67
COL22A1Q8NFW1 AC008536.3-201ENST00000623282 1599 ntBASIC19.26■□□□□ 0.67
COL22A1Q8NFW1 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC19.26■□□□□ 0.67
COL22A1Q8NFW1 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC19.26■□□□□ 0.67
COL22A1Q8NFW1 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL22A1Q8NFW1 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL22A1Q8NFW1 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC19.26■□□□□ 0.67
COL22A1Q8NFW1 GALP-202ENST00000440823 889 ntTSL 5 BASIC19.26■□□□□ 0.67
COL22A1Q8NFW1 KRT18P62-201ENST00000446618 1287 ntBASIC19.26■□□□□ 0.67
COL22A1Q8NFW1 AC092903.1-201ENST00000466506 262 ntBASIC19.26■□□□□ 0.67
COL22A1Q8NFW1 AC005740.1-201ENST00000515639 522 ntBASIC19.26■□□□□ 0.67
COL22A1Q8NFW1 AC120498.7-201ENST00000562876 330 ntBASIC19.26■□□□□ 0.67
COL22A1Q8NFW1 AC026336.4-201ENST00000624565 1050 ntBASIC19.26■□□□□ 0.67
COL22A1Q8NFW1 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL22A1Q8NFW1 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
COL22A1Q8NFW1 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
COL22A1Q8NFW1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL22A1Q8NFW1 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL22A1Q8NFW1 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC19.26■□□□□ 0.67
COL22A1Q8NFW1 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL22A1Q8NFW1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.26■□□□□ 0.67
COL22A1Q8NFW1 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL22A1Q8NFW1 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL22A1Q8NFW1 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL22A1Q8NFW1 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 ZNF877P-201ENST00000437614 612 ntBASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 PRSS3P1-201ENST00000503996 742 ntBASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms