Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
NUP35Q8NFH5 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
NUP35Q8NFH5 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
NUP35Q8NFH5 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
NUP35Q8NFH5 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC11.27□□□□□ -0.6
NUP35Q8NFH5 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
NUP35Q8NFH5 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC11.27□□□□□ -0.6
NUP35Q8NFH5 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC11.27□□□□□ -0.6
NUP35Q8NFH5 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
NUP35Q8NFH5 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.6
NUP35Q8NFH5 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
NUP35Q8NFH5 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
NUP35Q8NFH5 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
NUP35Q8NFH5 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
NUP35Q8NFH5 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
NUP35Q8NFH5 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 OS9-218ENST00000551035 2246 ntTSL 2 BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 CRYGEP-201ENST00000412192 528 ntBASIC11.27□□□□□ -0.61
NUP35Q8NFH5 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 KRT18P35-201ENST00000510488 1269 ntBASIC11.27□□□□□ -0.61
NUP35Q8NFH5 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 AC091304.2-201ENST00000564639 760 ntBASIC11.27□□□□□ -0.61
NUP35Q8NFH5 NAA38-207ENST00000576861 556 ntTSL 3 BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 TCAP-202ENST00000578283 583 ntTSL 5 BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 AC015910.1-201ENST00000579400 975 ntBASIC11.27□□□□□ -0.61
NUP35Q8NFH5 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 TP73-207ENST00000378290 1831 ntTSL 2 BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
NUP35Q8NFH5 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms