Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 AC023090.2-201ENST00000625182 2110 ntBASIC13.19□□□□□ -0.3
CPEB3Q8NE35 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 LINC01101-201ENST00000622953 1884 ntBASIC13.19□□□□□ -0.3
CPEB3Q8NE35 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 TMEM14DP-201ENST00000422205 345 ntBASIC13.19□□□□□ -0.3
CPEB3Q8NE35 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 GIMAP3P-201ENST00000495150 836 ntBASIC13.19□□□□□ -0.3
CPEB3Q8NE35 AC026434.2-201ENST00000506094 1078 ntBASIC13.19□□□□□ -0.3
CPEB3Q8NE35 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 TTTY23B-201ENST00000442790 549 ntBASIC13.18□□□□□ -0.3
CPEB3Q8NE35 AP001889.1-201ENST00000525414 633 ntBASIC13.18□□□□□ -0.3
CPEB3Q8NE35 SLC25A47P1-201ENST00000531577 414 ntBASIC13.18□□□□□ -0.3
CPEB3Q8NE35 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 AC239800.4-201ENST00000603712 296 ntBASIC13.18□□□□□ -0.3
CPEB3Q8NE35 AC145423.3-201ENST00000615987 467 ntBASIC13.18□□□□□ -0.3
CPEB3Q8NE35 AL035252.4-201ENST00000624174 288 ntBASIC13.18□□□□□ -0.3
CPEB3Q8NE35 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms