Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LSMEM1Q8N8F7 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LSMEM1Q8N8F7 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.83□□□□□ -0.2
LSMEM1Q8N8F7 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LSMEM1Q8N8F7 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.83□□□□□ -0.2
LSMEM1Q8N8F7 C1QBPP1-201ENST00000400117 770 ntBASIC13.83□□□□□ -0.2
LSMEM1Q8N8F7 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.83□□□□□ -0.2
LSMEM1Q8N8F7 AC114812.1-204ENST00000449669 728 ntBASIC13.83□□□□□ -0.2
LSMEM1Q8N8F7 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.83□□□□□ -0.2
LSMEM1Q8N8F7 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.83□□□□□ -0.2
LSMEM1Q8N8F7 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.83□□□□□ -0.2
LSMEM1Q8N8F7 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.83□□□□□ -0.2
LSMEM1Q8N8F7 AC124283.3-201ENST00000570869 594 ntBASIC13.83□□□□□ -0.2
LSMEM1Q8N8F7 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.83□□□□□ -0.2
LSMEM1Q8N8F7 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.83□□□□□ -0.2
LSMEM1Q8N8F7 TMEM261P1-201ENST00000604899 340 ntBASIC13.83□□□□□ -0.2
LSMEM1Q8N8F7 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
LSMEM1Q8N8F7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.83□□□□□ -0.2
LSMEM1Q8N8F7 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LSMEM1Q8N8F7 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LSMEM1Q8N8F7 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LSMEM1Q8N8F7 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LSMEM1Q8N8F7 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LSMEM1Q8N8F7 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.83□□□□□ -0.2
LSMEM1Q8N8F7 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LSMEM1Q8N8F7 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LSMEM1Q8N8F7 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LSMEM1Q8N8F7 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.83□□□□□ -0.2
LSMEM1Q8N8F7 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
LSMEM1Q8N8F7 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.83□□□□□ -0.2
LSMEM1Q8N8F7 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LSMEM1Q8N8F7 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LSMEM1Q8N8F7 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LSMEM1Q8N8F7 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
LSMEM1Q8N8F7 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LSMEM1Q8N8F7 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LSMEM1Q8N8F7 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 TCAF1P1-201ENST00000414990 2232 ntBASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 AC087499.6-201ENST00000411576 835 ntBASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 SOCS2P1-201ENST00000417727 557 ntBASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 PCDHA3-202ENST00000532566 4594 ntBASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LSMEM1Q8N8F7 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 CES1P1-201ENST00000421606 1704 ntBASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms